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- W2138045300 endingPage "12" @default.
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- W2138045300 abstract "In eukaryotic genes, exons are generally interrupted by introns. Accurately removing introns and joining exons together are essential processes in eukaryotic gene expression. With the avalanche of genome sequences generated in the postgenomic age, it is highly desired to develop automated methods for rapid and effective detection of splice sites that play important roles in gene structure annotation and even in RNA splicing. Although a series of computational methods were proposed for splice site identification, most of them neglected the intrinsic local structural properties. In the present study, a predictor called “iSS-PseDNC” was developed for identifying splice sites. In the new predictor, the sequences were formulated by a novel feature-vector called “pseudo dinucleotide composition” (PseDNC) into which six DNA local structural properties were incorporated. It was observed by the rigorous cross-validation tests on two benchmark datasets that the overall success rates achieved by iSS-PseDNC in identifying splice donor site and splice acceptor site were 85.45% and 87.73%, respectively. It is anticipated that iSS-PseDNC may become a useful tool for identifying splice sites and that the six DNA local structural properties described in this paper may provide novel insights for in-depth investigations into the mechanism of RNA splicing." @default.
- W2138045300 created "2016-06-24" @default.
- W2138045300 creator A5041539298 @default.
- W2138045300 creator A5070079578 @default.
- W2138045300 creator A5070470612 @default.
- W2138045300 creator A5083281814 @default.
- W2138045300 date "2014-01-01" @default.
- W2138045300 modified "2023-10-15" @default.
- W2138045300 title "iSS-PseDNC: Identifying Splicing Sites Using Pseudo Dinucleotide Composition" @default.
- W2138045300 cites W149741886 @default.
- W2138045300 cites W1514758940 @default.
- W2138045300 cites W1579014599 @default.
- W2138045300 cites W1913728360 @default.
- W2138045300 cites W1965749072 @default.
- W2138045300 cites W1966152415 @default.
- W2138045300 cites W1967888993 @default.
- W2138045300 cites W1969287319 @default.
- W2138045300 cites W1973513645 @default.
- W2138045300 cites W1975121892 @default.
- W2138045300 cites W1976133477 @default.
- W2138045300 cites W1976582164 @default.
- W2138045300 cites W1976978745 @default.
- W2138045300 cites W1977927254 @default.
- W2138045300 cites W1979648586 @default.
- W2138045300 cites W1979754886 @default.
- W2138045300 cites W1980256262 @default.
- W2138045300 cites W1980897319 @default.
- W2138045300 cites W1985718285 @default.
- W2138045300 cites W1986465827 @default.
- W2138045300 cites W1988580441 @default.
- W2138045300 cites W1989004319 @default.
- W2138045300 cites W1989751871 @default.
- W2138045300 cites W1992965194 @default.
- W2138045300 cites W1993791542 @default.
- W2138045300 cites W1998064689 @default.
- W2138045300 cites W1998291732 @default.
- W2138045300 cites W1999828721 @default.
- W2138045300 cites W2001591606 @default.
- W2138045300 cites W2002573639 @default.
- W2138045300 cites W2003613304 @default.
- W2138045300 cites W2004132756 @default.
- W2138045300 cites W2010211703 @default.
- W2138045300 cites W2010570026 @default.
- W2138045300 cites W2010877280 @default.
- W2138045300 cites W2015390729 @default.
- W2138045300 cites W2016319093 @default.
- W2138045300 cites W2021271347 @default.
- W2138045300 cites W2023644431 @default.
- W2138045300 cites W2024767324 @default.
- W2138045300 cites W2025301291 @default.
- W2138045300 cites W2026710881 @default.
- W2138045300 cites W2029119755 @default.
- W2138045300 cites W2029580264 @default.
- W2138045300 cites W2029904979 @default.
- W2138045300 cites W2031624313 @default.
- W2138045300 cites W2033720851 @default.
- W2138045300 cites W2034070267 @default.
- W2138045300 cites W2036329916 @default.
- W2138045300 cites W2038873127 @default.
- W2138045300 cites W2040183015 @default.
- W2138045300 cites W2041850015 @default.
- W2138045300 cites W2042667521 @default.
- W2138045300 cites W2042740064 @default.
- W2138045300 cites W2042789470 @default.
- W2138045300 cites W2044302302 @default.
- W2138045300 cites W2045544854 @default.
- W2138045300 cites W2051916497 @default.
- W2138045300 cites W2052514400 @default.
- W2138045300 cites W2053979203 @default.
- W2138045300 cites W2056192318 @default.
- W2138045300 cites W2067305692 @default.
- W2138045300 cites W2068182553 @default.
- W2138045300 cites W2069389043 @default.
- W2138045300 cites W2073223847 @default.
- W2138045300 cites W2074196504 @default.
- W2138045300 cites W2075176419 @default.
- W2138045300 cites W2075636838 @default.
- W2138045300 cites W2079044027 @default.
- W2138045300 cites W2079830359 @default.
- W2138045300 cites W2082916342 @default.
- W2138045300 cites W2083139287 @default.
- W2138045300 cites W2089989707 @default.
- W2138045300 cites W2090561245 @default.
- W2138045300 cites W2091505355 @default.
- W2138045300 cites W2092676806 @default.
- W2138045300 cites W2102354653 @default.
- W2138045300 cites W2103934447 @default.
- W2138045300 cites W2103940020 @default.
- W2138045300 cites W2105259921 @default.
- W2138045300 cites W2106141559 @default.
- W2138045300 cites W2108170494 @default.
- W2138045300 cites W2108497461 @default.
- W2138045300 cites W2111400482 @default.
- W2138045300 cites W2116660088 @default.
- W2138045300 cites W2124731003 @default.
- W2138045300 cites W2133312664 @default.
- W2138045300 cites W2135322638 @default.
- W2138045300 cites W2139166279 @default.