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- W2139968509 abstract "Neurogenesis - the generation of new neurons - is an ongoing process that persists in the adult mammalian brain of several species, including humans. In this work we analyze two discrete brain regions: the subventricular zone (SVZ) lining the walls of the lateral ventricles; and the subgranular zone (SGZ) of the dentate gyrus of the hippocampus in mice and shed light on the SVZ and SGZ specific neurogenesis. We propose a computational model that relies on the construction and analysis of region specific gene regulatory networks from the publicly available data on these two regions. Using this model a number of putative factors involved in neuronal stem cell (NSC) identity and maintenance were identified. We also demonstrate potential gender and niche-derived differences based on cell surface and nuclear receptors via Ar, Hif1a and Nr3c1. We have also conducted cell fate determinant analysis for SVZ NSC populations to Olfactory Bulb interneurons and SGZ NSC populations to the granule cells of the Granular Cell Layer. We report thirty-one candidate cell fate determinant gene pairs, ready to be validated. We focus on Ar - Pax6 in SVZ and Sox2 - Ncor1 in SGZ. Both pairs are expressed and localized in the suggested anatomical structures as shown by in situ hybridization and found to physically interact. Finally, we conclude that there are fundamental differences between SGZ and SVZ neurogenesis. We argue that these regulatory mechanisms are linked to the observed differential neurogenic potential of these regions. The presence of nuclear and cell surface receptors in the region specific regulatory circuits indicate the significance of niche derived extracellular factors, hormones and region specific factors such as the oxygen sensitivity, dictating SGZ and SVZ specific neurogenesis." @default.
- W2139968509 created "2016-06-24" @default.
- W2139968509 creator A5036136107 @default.
- W2139968509 creator A5061805930 @default.
- W2139968509 creator A5075664103 @default.
- W2139968509 creator A5082614669 @default.
- W2139968509 date "2014-12-18" @default.
- W2139968509 modified "2023-09-27" @default.
- W2139968509 title "Gene regulatory network analysis reveals differences in site-specific cell fate determination in mammalian brain" @default.
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- W2139968509 doi "https://doi.org/10.3389/fncel.2014.00437" @default.
- W2139968509 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4270183" @default.
- W2139968509 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/25565969" @default.
- W2139968509 hasPublicationYear "2014" @default.
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