Matches in SemOpenAlex for { <https://semopenalex.org/work/W2141654654> ?p ?o ?g. }
Showing items 1 to 89 of
89
with 100 items per page.
- W2141654654 endingPage "D689" @default.
- W2141654654 startingPage "D686" @default.
- W2141654654 abstract "The EST division of GenBank, dbEST, is widely used in many applications such as gene discovery and verification of exon–intron structure. However, the use of EST sequences in the dbEST libraries is often hampered by inconsistent terminology used to describe the library sources and by the presence of contaminated sequences. Here, we describe CleanEST, a novel database server that classified dbEST libraries and removes contaminants. We classified all dbEST libraries according to species and sequencing center. In addition, we further classified human EST libraries by anatomical and pathological systems according to eVOC ontologies. For each dbEST library, we provide two different cleansed sequences: ‘pre-cleansed’ and ‘user-cleansed’. To generate pre-cleansed sequences, we cleansed sequences in dbEST by alignment of EST sequences against well-known contamination sources: UniVec, Escherichia coli, mitochondria and chloroplast (for plant). To provide user-cleansed sequences, we built an automatic user-cleansing pipeline, in which sequences of a user-selected library are cleansed on-the-fly according to user-selected options. The server is available at http://cleanest.kobic.re.kr/ and the database is updated monthly." @default.
- W2141654654 created "2016-06-24" @default.
- W2141654654 creator A5001969939 @default.
- W2141654654 creator A5088265005 @default.
- W2141654654 date "2009-01-01" @default.
- W2141654654 modified "2023-09-23" @default.
- W2141654654 title "CleanEST: a database of cleansed EST libraries" @default.
- W2141654654 cites W1552419803 @default.
- W2141654654 cites W1992685092 @default.
- W2141654654 cites W1997954369 @default.
- W2141654654 cites W2041956242 @default.
- W2141654654 cites W2053927782 @default.
- W2141654654 cites W2074538482 @default.
- W2141654654 cites W2087064593 @default.
- W2141654654 cites W2101972919 @default.
- W2141654654 cites W2104086373 @default.
- W2141654654 cites W2107903949 @default.
- W2141654654 cites W2109348952 @default.
- W2141654654 cites W2112616522 @default.
- W2141654654 cites W2118675686 @default.
- W2141654654 cites W2121016876 @default.
- W2141654654 cites W2124943423 @default.
- W2141654654 cites W2138740633 @default.
- W2141654654 cites W2140450495 @default.
- W2141654654 cites W2152545090 @default.
- W2141654654 cites W4230932396 @default.
- W2141654654 cites W4251079740 @default.
- W2141654654 doi "https://doi.org/10.1093/nar/gkn648" @default.
- W2141654654 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/2686460" @default.
- W2141654654 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/18832365" @default.
- W2141654654 hasPublicationYear "2009" @default.
- W2141654654 type Work @default.
- W2141654654 sameAs 2141654654 @default.
- W2141654654 citedByCount "12" @default.
- W2141654654 countsByYear W21416546542012 @default.
- W2141654654 countsByYear W21416546542013 @default.
- W2141654654 countsByYear W21416546542014 @default.
- W2141654654 countsByYear W21416546542015 @default.
- W2141654654 countsByYear W21416546542019 @default.
- W2141654654 crossrefType "journal-article" @default.
- W2141654654 hasAuthorship W2141654654A5001969939 @default.
- W2141654654 hasAuthorship W2141654654A5088265005 @default.
- W2141654654 hasBestOaLocation W21416546541 @default.
- W2141654654 hasConcept C104317684 @default.
- W2141654654 hasConcept C138885662 @default.
- W2141654654 hasConcept C141231307 @default.
- W2141654654 hasConcept C149034497 @default.
- W2141654654 hasConcept C41008148 @default.
- W2141654654 hasConcept C41895202 @default.
- W2141654654 hasConcept C54355233 @default.
- W2141654654 hasConcept C547195049 @default.
- W2141654654 hasConcept C77088390 @default.
- W2141654654 hasConcept C79029880 @default.
- W2141654654 hasConcept C86803240 @default.
- W2141654654 hasConceptScore W2141654654C104317684 @default.
- W2141654654 hasConceptScore W2141654654C138885662 @default.
- W2141654654 hasConceptScore W2141654654C141231307 @default.
- W2141654654 hasConceptScore W2141654654C149034497 @default.
- W2141654654 hasConceptScore W2141654654C41008148 @default.
- W2141654654 hasConceptScore W2141654654C41895202 @default.
- W2141654654 hasConceptScore W2141654654C54355233 @default.
- W2141654654 hasConceptScore W2141654654C547195049 @default.
- W2141654654 hasConceptScore W2141654654C77088390 @default.
- W2141654654 hasConceptScore W2141654654C79029880 @default.
- W2141654654 hasConceptScore W2141654654C86803240 @default.
- W2141654654 hasIssue "Database" @default.
- W2141654654 hasLocation W21416546541 @default.
- W2141654654 hasLocation W21416546542 @default.
- W2141654654 hasLocation W21416546543 @default.
- W2141654654 hasLocation W21416546544 @default.
- W2141654654 hasOpenAccess W2141654654 @default.
- W2141654654 hasPrimaryLocation W21416546541 @default.
- W2141654654 hasRelatedWork W1890010806 @default.
- W2141654654 hasRelatedWork W1973456185 @default.
- W2141654654 hasRelatedWork W2015887847 @default.
- W2141654654 hasRelatedWork W2059983455 @default.
- W2141654654 hasRelatedWork W2371635796 @default.
- W2141654654 hasRelatedWork W2383815826 @default.
- W2141654654 hasRelatedWork W2515671908 @default.
- W2141654654 hasRelatedWork W253490991 @default.
- W2141654654 hasRelatedWork W2946505882 @default.
- W2141654654 hasRelatedWork W3034803574 @default.
- W2141654654 hasVolume "37" @default.
- W2141654654 isParatext "false" @default.
- W2141654654 isRetracted "false" @default.
- W2141654654 magId "2141654654" @default.
- W2141654654 workType "article" @default.