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• W2146192112 endingPage "1454" @default.
• W2146192112 startingPage "1439" @default.
• W2146192112 abstract "Blue copper proteins are type-I copper-containing redox proteins whose role is to shuttle electrons from an electron donor to an electron acceptor in bacteria and plants. A large amount of experimental data is available on blue copper proteins; however, their functional characterization is hindered by the complexity of redox processes in biological systems. We describe here the application of a semiquantitative method based on a comparative analysis of molecular interaction fields to gain insights into the recognition properties of blue copper proteins. Molecular electrostatic and hydrophobic potentials were computed and compared for a set of 33 experimentally-determined structures of proteins from seven blue copper subfamilies, and the results were quantified by means of similarity indices. The analysis provides a classification of the blue copper proteins and shows that (I) comparison of the molecular electrostatic potentials provides useful information complementary to that highlighted by sequence analysis; (2) similarities in recognition properties can be detected for proteins belonging to different subfamilies, such as amicyanins and pseudoazurins, that may be isofunctional proteins; (3) dissimilarities in interaction properties, consistent with experimentally different binding specificities, may be observed between proteins belonging to the same subfamily, such as cyanobacterial and eukaryotic plastocyanins; (4) proteins with low sequence identity, such as azurins and pseudoazurins, can have sufficient similarity to bind to similar electron donors and acceptors while having different binding specificity profiles." @default.
• W2146192112 created "2016-06-24" @default.
• W2146192112 creator A5011813974 @default.
• W2146192112 creator A5033757111 @default.
• W2146192112 creator A5080155257 @default.
• W2146192112 creator A5084206111 @default.
• W2146192112 date "2000-01-01" @default.
• W2146192112 modified "2023-09-27" @default.
• W2146192112 title "Blue copper proteins: A comparative analysis of their molecular interaction properties" @default.
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• W2146192112 doi "https://doi.org/10.1110/ps.9.8.1439" @default.
• W2146192112 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/2144732" @default.
• W2146192112 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/10975566" @default.
• W2146192112 hasPublicationYear "2000" @default.
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