FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2146215397> ?p ?o ?g. }

• W2146215397 endingPage "1338" @default.
• W2146215397 startingPage "1327" @default.
• W2146215397 abstract "Tobamoviruses, mostly isolated from solanaceous plants, may represent ancient virus lineages that have codiverged with their hosts. Recently completed nucleotide sequences of six nonsolanaceous tobamoviruses allowed assessment of the codivergence hypothesis and support a third subgroup within tobamoviruses. The genomic sequences of 12 tobamoviruses and the partial sequences of 11 others have been analyzed. Comparisons of the predicted protein sequences revealed three clusters of tobamoviruses, corresponding to those infecting solanaceous species (subgroup 1), those infecting cucurbits and legumes (subgroup 2), and those infecting crucifers. The orchid-infecting odontoglossum ringspot tobamovirus was associated with subgroup 1 genomes by its coat and movement protein sequences, but with the crucifer-pathogenic tobamoviruses by the remainder of its genome, suggesting that it is the progeny of a recombinant. For four of five genomic regions, subgroup 1 and 3 genomes were equidistant from a subgroup 2 genome chosen for comparison, suggesting uniform rates of evolution. A phylogenetic tree of plant families based on the tobamoviruses they harbor was congruent with that based on rubisco sequences but had a different root, suggesting that codivergence was tempered by rare events of viruses of one family colonizing another family. The proposed subgroup 3 viruses probably have an origin of virion assembly in the movement protein gene, a large (25-codon) overlap of movement and coat protein open reading frames, and a comparably shorter genome. Codon-position-dependent base compositions and codon prevalences suggested that the coat protein frame of the overlap region was ancestral. Bootstrapped parsimony analysis of the nucleotides in the overlap region and of the sequences translated from the -1 frame (the subgroup 3 movement protein frame) of this region produced trees inconsistent with those deduced from other regions. The results are consistent with a model in which a no or short overlap organization was ancestral. Despite encoding of subgroup 2 and 3 movement protein C-termini by nonhomologous nucleotides, weak similarities between their amino acid sequences suggested convergent sequence evolution." @default.
• W2146215397 created "2016-06-24" @default.
• W2146215397 creator A5029237608 @default.
• W2146215397 creator A5061531680 @default.
• W2146215397 creator A5062040496 @default.
• W2146215397 date "1996-12-01" @default.
• W2146215397 modified "2023-10-03" @default.
• W2146215397 title "Tobamovirus evolution: gene overlaps, recombination, and taxonomic implications" @default.
• W2146215397 cites W136988059 @default.
• W2146215397 cites W1525789155 @default.
• W2146215397 cites W1547087576 @default.
• W2146215397 cites W1570145321 @default.
• W2146215397 cites W1763144417 @default.
• W2146215397 cites W1847098232 @default.
• W2146215397 cites W1963523311 @default.
• W2146215397 cites W1969153299 @default.
• W2146215397 cites W1970623770 @default.
• W2146215397 cites W1972474060 @default.
• W2146215397 cites W1972669862 @default.
• W2146215397 cites W1976666280 @default.
• W2146215397 cites W1980821646 @default.
• W2146215397 cites W1983747064 @default.
• W2146215397 cites W1994323818 @default.
• W2146215397 cites W2012430357 @default.
• W2146215397 cites W2012729381 @default.
• W2146215397 cites W2013009337 @default.
• W2146215397 cites W2029069621 @default.
• W2146215397 cites W2036764193 @default.
• W2146215397 cites W2046205978 @default.
• W2146215397 cites W2055043387 @default.
• W2146215397 cites W2055850665 @default.
• W2146215397 cites W2057179571 @default.
• W2146215397 cites W2066374310 @default.
• W2146215397 cites W2068018119 @default.
• W2146215397 cites W2081300351 @default.
• W2146215397 cites W2082087271 @default.
• W2146215397 cites W2087813389 @default.
• W2146215397 cites W2097706568 @default.
• W2146215397 cites W2103983186 @default.
• W2146215397 cites W2117708081 @default.
• W2146215397 cites W2126505139 @default.
• W2146215397 cites W2127308004 @default.
• W2146215397 cites W2127501111 @default.
• W2146215397 cites W2133104753 @default.
• W2146215397 cites W2134232482 @default.
• W2146215397 cites W2138892620 @default.
• W2146215397 cites W2149929756 @default.
• W2146215397 cites W2324278256 @default.
• W2146215397 cites W2328972922 @default.
• W2146215397 cites W2990964767 @default.
• W2146215397 cites W33910854 @default.
• W2146215397 cites W9694778 @default.
• W2146215397 doi "https://doi.org/10.1093/oxfordjournals.molbev.a025579" @default.
• W2146215397 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/8952077" @default.
• W2146215397 hasPublicationYear "1996" @default.
• W2146215397 type Work @default.
• W2146215397 sameAs 2146215397 @default.
• W2146215397 citedByCount "104" @default.
• W2146215397 countsByYear W21462153972012 @default.
• W2146215397 countsByYear W21462153972013 @default.
• W2146215397 countsByYear W21462153972014 @default.
• W2146215397 countsByYear W21462153972015 @default.
• W2146215397 countsByYear W21462153972016 @default.
• W2146215397 countsByYear W21462153972017 @default.
• W2146215397 countsByYear W21462153972018 @default.
• W2146215397 countsByYear W21462153972019 @default.
• W2146215397 countsByYear W21462153972020 @default.
• W2146215397 countsByYear W21462153972022 @default.
• W2146215397 countsByYear W21462153972023 @default.
• W2146215397 crossrefType "journal-article" @default.
• W2146215397 hasAuthorship W2146215397A5029237608 @default.
• W2146215397 hasAuthorship W2146215397A5061531680 @default.
• W2146215397 hasAuthorship W2146215397A5062040496 @default.
• W2146215397 hasConcept C104317684 @default.
• W2146215397 hasConcept C109110057 @default.
• W2146215397 hasConcept C141231307 @default.
• W2146215397 hasConcept C159047783 @default.
• W2146215397 hasConcept C193252679 @default.
• W2146215397 hasConcept C2522874641 @default.
• W2146215397 hasConcept C2778786252 @default.
• W2146215397 hasConcept C2780292513 @default.
• W2146215397 hasConcept C2994092193 @default.
• W2146215397 hasConcept C54355233 @default.
• W2146215397 hasConcept C67705224 @default.
• W2146215397 hasConcept C78458016 @default.
• W2146215397 hasConcept C86803240 @default.
• W2146215397 hasConceptScore W2146215397C104317684 @default.
• W2146215397 hasConceptScore W2146215397C109110057 @default.
• W2146215397 hasConceptScore W2146215397C141231307 @default.
• W2146215397 hasConceptScore W2146215397C159047783 @default.
• W2146215397 hasConceptScore W2146215397C193252679 @default.
• W2146215397 hasConceptScore W2146215397C2522874641 @default.
• W2146215397 hasConceptScore W2146215397C2778786252 @default.
• W2146215397 hasConceptScore W2146215397C2780292513 @default.
• W2146215397 hasConceptScore W2146215397C2994092193 @default.
• W2146215397 hasConceptScore W2146215397C54355233 @default.
• W2146215397 hasConceptScore W2146215397C67705224 @default.
• W2146215397 hasConceptScore W2146215397C78458016 @default.

• next