FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2149096476> ?p ?o ?g. }

• W2149096476 endingPage "381" @default.
• W2149096476 startingPage "374" @default.
• W2149096476 abstract "We determined the complete chloroplast genome (cpDNA) of Ginkgo biloba (common name: ginkgo), the only relict of ginkgophytes from the Triassic Period. The cpDNA molecule of ginkgo is quadripartite and circular, with a length of 156,945 bp, which is 6,458 bp shorter than that of Cycas taitungensis. In ginkgo cpDNA, rpl23 becomes pseudo, only one copy of ycf2 is retained, and there are at least five editing sites. We propose that the retained ycf2 is a duplicate of the ancestral ycf2, and the ancestral one has been lost from the inverted repeat A (IRA). This loss event should have occurred and led to the contraction of IRs after ginkgos diverged from other gymnosperms. A novel cluster of three transfer RNA (tRNA) genes, trnY-AUA, trnC-ACA, and trnSeC-UCA, was predicted to be located between trnC-GCA and rpoB of the large single-copy region. Our phylogenetic analysis strongly suggests that the three predicted tRNA genes are duplicates of trnC-GCA. Interestingly, in ginkgo cpDNA, the loss of one ycf2 copy does not significantly elevate the synonymous rate (Ks) of the retained copy, which disagrees with the view of Perry and Wolfe (2002) that one of the two-copy genes is subjected to elevated Ks when its counterpart has been lost. We hypothesize that the loss of one ycf2 is likely recent, and therefore, the acquired Ks of the retained copy is low. Our data reveal that ginkgo possesses several unique features that contribute to our understanding of the cpDNA evolution in seed plants." @default.
• W2149096476 created "2016-06-24" @default.
• W2149096476 creator A5004771644 @default.
• W2149096476 creator A5006036679 @default.
• W2149096476 creator A5017146527 @default.
• W2149096476 creator A5035790190 @default.
• W2149096476 date "2012-01-01" @default.
• W2149096476 modified "2023-10-16" @default.
• W2149096476 title "The Complete Chloroplast Genome of Ginkgo biloba Reveals the Mechanism of Inverted Repeat Contraction" @default.
• W2149096476 cites W1840438575 @default.
• W2149096476 cites W1969726207 @default.
• W2149096476 cites W1971045590 @default.
• W2149096476 cites W1971864911 @default.
• W2149096476 cites W1989042412 @default.
• W2149096476 cites W1996982963 @default.
• W2149096476 cites W2028513168 @default.
• W2149096476 cites W2028683675 @default.
• W2149096476 cites W2033713984 @default.
• W2149096476 cites W2046183549 @default.
• W2149096476 cites W2053351512 @default.
• W2149096476 cites W2067535938 @default.
• W2149096476 cites W2072993689 @default.
• W2149096476 cites W2086218298 @default.
• W2149096476 cites W2087360477 @default.
• W2149096476 cites W2090106516 @default.
• W2149096476 cites W2090463452 @default.
• W2149096476 cites W2106882534 @default.
• W2149096476 cites W2120301705 @default.
• W2149096476 cites W2132632499 @default.
• W2149096476 cites W2135581989 @default.
• W2149096476 cites W2136846721 @default.
• W2149096476 cites W2139454502 @default.
• W2149096476 cites W2140865425 @default.
• W2149096476 cites W2146124486 @default.
• W2149096476 cites W2147096538 @default.
• W2149096476 cites W2147551838 @default.
• W2149096476 cites W2161662581 @default.
• W2149096476 cites W2174945944 @default.
• W2149096476 doi "https://doi.org/10.1093/gbe/evs021" @default.
• W2149096476 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3514960" @default.
• W2149096476 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/22403032" @default.
• W2149096476 hasPublicationYear "2012" @default.
• W2149096476 type Work @default.
• W2149096476 sameAs 2149096476 @default.
• W2149096476 citedByCount "86" @default.
• W2149096476 countsByYear W21490964762012 @default.
• W2149096476 countsByYear W21490964762013 @default.
• W2149096476 countsByYear W21490964762014 @default.
• W2149096476 countsByYear W21490964762015 @default.
• W2149096476 countsByYear W21490964762016 @default.
• W2149096476 countsByYear W21490964762017 @default.
• W2149096476 countsByYear W21490964762018 @default.
• W2149096476 countsByYear W21490964762019 @default.
• W2149096476 countsByYear W21490964762020 @default.
• W2149096476 countsByYear W21490964762021 @default.
• W2149096476 countsByYear W21490964762022 @default.
• W2149096476 countsByYear W21490964762023 @default.
• W2149096476 crossrefType "journal-article" @default.
• W2149096476 hasAuthorship W2149096476A5004771644 @default.
• W2149096476 hasAuthorship W2149096476A5006036679 @default.
• W2149096476 hasAuthorship W2149096476A5017146527 @default.
• W2149096476 hasAuthorship W2149096476A5035790190 @default.
• W2149096476 hasBestOaLocation W21490964761 @default.
• W2149096476 hasConcept C104317684 @default.
• W2149096476 hasConcept C141231307 @default.
• W2149096476 hasConcept C153957851 @default.
• W2149096476 hasConcept C193252679 @default.
• W2149096476 hasConcept C2778998842 @default.
• W2149096476 hasConcept C2779706397 @default.
• W2149096476 hasConcept C44465124 @default.
• W2149096476 hasConcept C48050816 @default.
• W2149096476 hasConcept C51603236 @default.
• W2149096476 hasConcept C54355233 @default.
• W2149096476 hasConcept C59822182 @default.
• W2149096476 hasConcept C67705224 @default.
• W2149096476 hasConcept C70343354 @default.
• W2149096476 hasConcept C78458016 @default.
• W2149096476 hasConcept C86803240 @default.
• W2149096476 hasConceptScore W2149096476C104317684 @default.
• W2149096476 hasConceptScore W2149096476C141231307 @default.
• W2149096476 hasConceptScore W2149096476C153957851 @default.
• W2149096476 hasConceptScore W2149096476C193252679 @default.
• W2149096476 hasConceptScore W2149096476C2778998842 @default.
• W2149096476 hasConceptScore W2149096476C2779706397 @default.
• W2149096476 hasConceptScore W2149096476C44465124 @default.
• W2149096476 hasConceptScore W2149096476C48050816 @default.
• W2149096476 hasConceptScore W2149096476C51603236 @default.
• W2149096476 hasConceptScore W2149096476C54355233 @default.
• W2149096476 hasConceptScore W2149096476C59822182 @default.
• W2149096476 hasConceptScore W2149096476C67705224 @default.
• W2149096476 hasConceptScore W2149096476C70343354 @default.
• W2149096476 hasConceptScore W2149096476C78458016 @default.
• W2149096476 hasConceptScore W2149096476C86803240 @default.
• W2149096476 hasIssue "3" @default.
• W2149096476 hasLocation W21490964761 @default.
• W2149096476 hasLocation W21490964762 @default.
• W2149096476 hasLocation W21490964763 @default.
• W2149096476 hasLocation W21490964764 @default.

• next