Matches in SemOpenAlex for { <https://semopenalex.org/work/W2153002912> ?p ?o ?g. }
- W2153002912 endingPage "9031" @default.
- W2153002912 startingPage "9023" @default.
- W2153002912 abstract "A total of 101,270 eggplant expressed sequence tag (EST) sequences at public databases were used to search for simple sequence repeats (SSRs) and 405 potential SSR loci were identified from 388 sequences. The highest proportion (34.07%, 138) was represented by trinucleotide, followed by dinucleotide (19.51%, 79) and hexanucleotide (15.8%, 64). Among the dinucleotide repeats, AG/CT was the most common (55.69%), followed by AT/AT (31.64%) and AC/GT (12.66%).Further, 288 pairs of primers were developed from these sequences. A random set of 100 EST-SSR primers were amplified in 12 eggplant accessions and 88 successfully amplified expect PCR products. 32 markers revealed 83 polymorphic alleles among the 42 cultivated accessions and the number of allelles per locus varied between 2 and 6 (mean 2.6). Polymorphism information content (PIC) values among the 42 cultivated types were calculated and varied from 0.045 to 0.701 (mean 0.289). The markers showed low frequency transferability in Solanaceae. The 32 SSRs were used to evaluate genetic diversity. These SSRs will be valuable markers for future genetic study, such as genetic diversity estimation, linkage mapping, association mapping and molecular breeding. Key words: Expressed sequence tags, transferability, diversity, dendrogram." @default.
- W2153002912 created "2016-06-24" @default.
- W2153002912 creator A5006839175 @default.
- W2153002912 creator A5011366968 @default.
- W2153002912 creator A5023363049 @default.
- W2153002912 creator A5074398799 @default.
- W2153002912 creator A5074691262 @default.
- W2153002912 date "2011-08-17" @default.
- W2153002912 modified "2023-09-30" @default.
- W2153002912 title "Characterization of novel developed expressed sequence tag (EST)-derived simple sequence repeat (SSR) markers and their application in diversity analysis of eggplant" @default.
- W2153002912 cites W1499500424 @default.
- W2153002912 cites W1531625140 @default.
- W2153002912 cites W1568479515 @default.
- W2153002912 cites W1878048534 @default.
- W2153002912 cites W1954856188 @default.
- W2153002912 cites W1964583015 @default.
- W2153002912 cites W1964585288 @default.
- W2153002912 cites W1967084079 @default.
- W2153002912 cites W1974090168 @default.
- W2153002912 cites W1987328397 @default.
- W2153002912 cites W1989100257 @default.
- W2153002912 cites W2003235189 @default.
- W2153002912 cites W2008767843 @default.
- W2153002912 cites W2021489579 @default.
- W2153002912 cites W2023536394 @default.
- W2153002912 cites W2027471820 @default.
- W2153002912 cites W2032090256 @default.
- W2153002912 cites W2045639680 @default.
- W2153002912 cites W2052128617 @default.
- W2153002912 cites W2052159465 @default.
- W2153002912 cites W2055043387 @default.
- W2153002912 cites W2061859576 @default.
- W2153002912 cites W2076657055 @default.
- W2153002912 cites W2077589165 @default.
- W2153002912 cites W2083524378 @default.
- W2153002912 cites W2083871253 @default.
- W2153002912 cites W2087006947 @default.
- W2153002912 cites W2098086876 @default.
- W2153002912 cites W2104043339 @default.
- W2153002912 cites W2106781951 @default.
- W2153002912 cites W2109370849 @default.
- W2153002912 cites W2111881545 @default.
- W2153002912 cites W2114646831 @default.
- W2153002912 cites W2115328415 @default.
- W2153002912 cites W2123324769 @default.
- W2153002912 cites W2148862355 @default.
- W2153002912 cites W2160593504 @default.
- W2153002912 cites W2164783348 @default.
- W2153002912 cites W2166265186 @default.
- W2153002912 cites W2168300053 @default.
- W2153002912 cites W2365142003 @default.
- W2153002912 cites W2524559577 @default.
- W2153002912 cites W377677944 @default.
- W2153002912 cites W2612032254 @default.
- W2153002912 cites W2890599175 @default.
- W2153002912 doi "https://doi.org/10.5897/ajb11.1029" @default.
- W2153002912 hasPublicationYear "2011" @default.
- W2153002912 type Work @default.
- W2153002912 sameAs 2153002912 @default.
- W2153002912 citedByCount "10" @default.
- W2153002912 countsByYear W21530029122012 @default.
- W2153002912 countsByYear W21530029122013 @default.
- W2153002912 countsByYear W21530029122014 @default.
- W2153002912 countsByYear W21530029122015 @default.
- W2153002912 countsByYear W21530029122016 @default.
- W2153002912 countsByYear W21530029122019 @default.
- W2153002912 countsByYear W21530029122023 @default.
- W2153002912 crossrefType "journal-article" @default.
- W2153002912 hasAuthorship W2153002912A5006839175 @default.
- W2153002912 hasAuthorship W2153002912A5011366968 @default.
- W2153002912 hasAuthorship W2153002912A5023363049 @default.
- W2153002912 hasAuthorship W2153002912A5074398799 @default.
- W2153002912 hasAuthorship W2153002912A5074691262 @default.
- W2153002912 hasBestOaLocation W21530029121 @default.
- W2153002912 hasConcept C104317684 @default.
- W2153002912 hasConcept C105795698 @default.
- W2153002912 hasConcept C140331021 @default.
- W2153002912 hasConcept C141231307 @default.
- W2153002912 hasConcept C144024400 @default.
- W2153002912 hasConcept C149034497 @default.
- W2153002912 hasConcept C149923435 @default.
- W2153002912 hasConcept C172312944 @default.
- W2153002912 hasConcept C180754005 @default.
- W2153002912 hasConcept C190789776 @default.
- W2153002912 hasConcept C2908647359 @default.
- W2153002912 hasConcept C2909495079 @default.
- W2153002912 hasConcept C33923547 @default.
- W2153002912 hasConcept C54355233 @default.
- W2153002912 hasConcept C61272859 @default.
- W2153002912 hasConcept C61320498 @default.
- W2153002912 hasConcept C81977670 @default.
- W2153002912 hasConcept C84597430 @default.
- W2153002912 hasConcept C86803240 @default.
- W2153002912 hasConceptScore W2153002912C104317684 @default.
- W2153002912 hasConceptScore W2153002912C105795698 @default.
- W2153002912 hasConceptScore W2153002912C140331021 @default.
- W2153002912 hasConceptScore W2153002912C141231307 @default.
- W2153002912 hasConceptScore W2153002912C144024400 @default.