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- W2158195770 abstract "Transposable elements (TEs) are ubiquitous inhabitants of eukaryotic genomes and their proliferation and dispersal shape genome architectures and diversity. Nevertheless, TE dynamics are often explored for one species at a time and are rarely considered in ecological contexts. Recent work with plant pathogens suggests a link between symbiosis and TE abundance. The genomes of pathogenic fungi appear to house an increased abundance of TEs, and TEs are frequently associated with the genes involved in symbiosis. To investigate whether this pattern is general, and relevant to mutualistic plant-fungal symbioses, we sequenced the genomes of related asymbiotic (AS) and ectomycorrhizal (ECM) Amanita fungi. Using methods developed to interrogate both assembled and unassembled sequences, we characterized and quantified TEs across three AS and three ECM species, including the AS outgroup Volvariella volvacea. The ECM genomes are characterized by abundant numbers of TEs, an especially prominent feature of unassembled sequencing libraries. Increased TE activity in ECM species is also supported by phylogenetic analysis of the three most abundant TE superfamilies; phylogenies revealed many radiations within contemporary ECM species. However, the AS species Amanita thiersii also houses extensive amplifications of elements, highlighting the influence of additional evolutionary parameters on TE abundance. Our analyses provide further evidence for a link between symbiotic associations among plants and fungi, and increased TE activity, while highlighting the importance individual species' natural histories may have in shaping genome architecture." @default.
- W2158195770 created "2016-06-24" @default.
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- W2158195770 date "2014-06-12" @default.
- W2158195770 modified "2023-10-05" @default.
- W2158195770 title "Transposable Element Dynamics among Asymbiotic and Ectomycorrhizal Amanita Fungi" @default.
- W2158195770 cites W130330615 @default.
- W2158195770 cites W1575422030 @default.
- W2158195770 cites W1627725260 @default.
- W2158195770 cites W1964839440 @default.
- W2158195770 cites W1965368044 @default.
- W2158195770 cites W1965960290 @default.
- W2158195770 cites W1966822396 @default.
- W2158195770 cites W1969079198 @default.
- W2158195770 cites W1972156844 @default.
- W2158195770 cites W1977640433 @default.
- W2158195770 cites W1981218481 @default.
- W2158195770 cites W1982530526 @default.
- W2158195770 cites W1984909531 @default.
- W2158195770 cites W1988090113 @default.
- W2158195770 cites W1988437534 @default.
- W2158195770 cites W1988714210 @default.
- W2158195770 cites W1993158258 @default.
- W2158195770 cites W1994500718 @default.
- W2158195770 cites W1997724443 @default.
- W2158195770 cites W1997988617 @default.
- W2158195770 cites W1998671658 @default.
- W2158195770 cites W2007497503 @default.
- W2158195770 cites W2008857432 @default.
- W2158195770 cites W2014704298 @default.
- W2158195770 cites W2020660179 @default.
- W2158195770 cites W2022194039 @default.
- W2158195770 cites W2022414939 @default.
- W2158195770 cites W2022986961 @default.
- W2158195770 cites W2027396717 @default.
- W2158195770 cites W2027727840 @default.
- W2158195770 cites W2033174994 @default.
- W2158195770 cites W2033218878 @default.
- W2158195770 cites W2035260243 @default.
- W2158195770 cites W2044231545 @default.
- W2158195770 cites W2046137036 @default.
- W2158195770 cites W2048540261 @default.
- W2158195770 cites W2051681748 @default.
- W2158195770 cites W2054254276 @default.
- W2158195770 cites W2054562396 @default.
- W2158195770 cites W2059864757 @default.
- W2158195770 cites W2061338306 @default.
- W2158195770 cites W2061646232 @default.
- W2158195770 cites W2071501400 @default.
- W2158195770 cites W2073915279 @default.
- W2158195770 cites W2082221072 @default.
- W2158195770 cites W2083697678 @default.
- W2158195770 cites W2085154635 @default.
- W2158195770 cites W2089107429 @default.
- W2158195770 cites W2092026879 @default.
- W2158195770 cites W2100311116 @default.
- W2158195770 cites W2101786683 @default.
- W2158195770 cites W2103546861 @default.
- W2158195770 cites W2104905992 @default.
- W2158195770 cites W2108135089 @default.
- W2158195770 cites W2108234281 @default.
- W2158195770 cites W2108787198 @default.
- W2158195770 cites W2109575687 @default.
- W2158195770 cites W2110655634 @default.
- W2158195770 cites W2114491297 @default.
- W2158195770 cites W2115888213 @default.
- W2158195770 cites W2120640607 @default.
- W2158195770 cites W2122954888 @default.
- W2158195770 cites W2124351063 @default.
- W2158195770 cites W2125233169 @default.
- W2158195770 cites W2127266436 @default.
- W2158195770 cites W2127740005 @default.
- W2158195770 cites W2127847431 @default.
- W2158195770 cites W2131088968 @default.
- W2158195770 cites W2135093792 @default.
- W2158195770 cites W2136280642 @default.
- W2158195770 cites W2136388904 @default.
- W2158195770 cites W2138840761 @default.
- W2158195770 cites W2139134537 @default.
- W2158195770 cites W2142163233 @default.
- W2158195770 cites W2146728635 @default.
- W2158195770 cites W2151899848 @default.
- W2158195770 cites W2152805652 @default.
- W2158195770 cites W2153432101 @default.
- W2158195770 cites W2154099008 @default.
- W2158195770 cites W2155452725 @default.
- W2158195770 cites W2157786923 @default.
- W2158195770 cites W2160444236 @default.
- W2158195770 cites W2161479301 @default.
- W2158195770 cites W2162759662 @default.
- W2158195770 cites W2167002466 @default.
- W2158195770 cites W2168696662 @default.