FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2169209858> ?p ?o ?g. }

• W2169209858 endingPage "272" @default.
• W2169209858 startingPage "272" @default.
• W2169209858 abstract "Molecular phylogenetics has entered a new era in which species trees are estimated from a collection of gene trees using methods that accommodate their heterogeneity and discordance with the species tree. Empirical evaluation of species trees is necessary to assess the performance (i.e., accuracy and precision) of these methods with real data, which consists of gene genealogies likely shaped by different historical and demographic processes. We analyzed 20 loci for 16 species of the South American lizards of the Liolaemus darwinii species group and reconstructed a species tree with *BEAST, then compared the performance of this method under different sampling strategies of loci, individuals, and sequence lengths. We found an increase in the accuracy and precision of species trees with the number of loci, but for any number of loci, accuracy substantially decreased only when using only one individual per species or 25% of the full sequence length (∼ 147 bp). In addition, locus “informativeness” was an important factor in the accuracy/precision of species trees when using a few loci, but it became increasingly irrelevant with additional loci. Our empirical results combined with the previous simulation studies suggest that there is an optimal range of sampling effort of loci, individuals, and sequence lengths for a given speciation history and information content of the data. Future studies should be directed toward further assessment of other factors that can impact performance of species trees, including gene flow, locus “informativeness,” tree shape, missing data, and errors in species delimitation." @default.
• W2169209858 created "2016-06-24" @default.
• W2169209858 creator A5014444168 @default.
• W2169209858 creator A5024030384 @default.
• W2169209858 creator A5039204103 @default.
• W2169209858 creator A5050199826 @default.
• W2169209858 date "2011-11-10" @default.
• W2169209858 modified "2023-09-27" @default.
• W2169209858 title "Accuracy and Precision of Species Trees: Effects of Locus, Individual, and Base Pair Sampling on Inference of Species Trees in Lizards of the Liolaemus darwinii Group (Squamata, Liolaemidae)" @default.
• W2169209858 cites W1897064680 @default.
• W2169209858 cites W1964422196 @default.
• W2169209858 cites W1972016840 @default.
• W2169209858 cites W2008635309 @default.
• W2169209858 cites W2019886693 @default.
• W2169209858 cites W2020089203 @default.
• W2169209858 cites W2037654474 @default.
• W2169209858 cites W2052965127 @default.
• W2169209858 cites W2069182969 @default.
• W2169209858 cites W2084761838 @default.
• W2169209858 cites W2086252542 @default.
• W2169209858 cites W2090326420 @default.
• W2169209858 cites W2096689134 @default.
• W2169209858 cites W2097011006 @default.
• W2169209858 cites W2098747033 @default.
• W2169209858 cites W2101132100 @default.
• W2169209858 cites W2103673391 @default.
• W2169209858 cites W2103982344 @default.
• W2169209858 cites W2107508473 @default.
• W2169209858 cites W2107608009 @default.
• W2169209858 cites W2108116104 @default.
• W2169209858 cites W2110755408 @default.
• W2169209858 cites W2110835349 @default.
• W2169209858 cites W2111654219 @default.
• W2169209858 cites W2113531912 @default.
• W2169209858 cites W2113589554 @default.
• W2169209858 cites W2114227052 @default.
• W2169209858 cites W2118127427 @default.
• W2169209858 cites W2119022294 @default.
• W2169209858 cites W2120323779 @default.
• W2169209858 cites W2120611093 @default.
• W2169209858 cites W2122465473 @default.
• W2169209858 cites W2126077523 @default.
• W2169209858 cites W2127670352 @default.
• W2169209858 cites W2127713506 @default.
• W2169209858 cites W2127824331 @default.
• W2169209858 cites W2128482446 @default.
• W2169209858 cites W2128749529 @default.
• W2169209858 cites W2134599124 @default.
• W2169209858 cites W2135124881 @default.
• W2169209858 cites W2136874569 @default.
• W2169209858 cites W2137015675 @default.
• W2169209858 cites W2137180017 @default.
• W2169209858 cites W2141184390 @default.
• W2169209858 cites W2143334889 @default.
• W2169209858 cites W2144074455 @default.
• W2169209858 cites W2144449666 @default.
• W2169209858 cites W2144456315 @default.
• W2169209858 cites W2145608399 @default.
• W2169209858 cites W2148723086 @default.
• W2169209858 cites W2151320514 @default.
• W2169209858 cites W2158482855 @default.
• W2169209858 cites W2158658822 @default.
• W2169209858 cites W2159446562 @default.
• W2169209858 cites W2160936843 @default.
• W2169209858 cites W2186169612 @default.
• W2169209858 cites W2279685652 @default.
• W2169209858 cites W2301105228 @default.
• W2169209858 cites W2549754107 @default.
• W2169209858 cites W4231784440 @default.
• W2169209858 cites W4252582422 @default.
• W2169209858 cites W4362073016 @default.
• W2169209858 doi "https://doi.org/10.1093/sysbio/syr105" @default.
• W2169209858 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/22076301" @default.
• W2169209858 hasPublicationYear "2011" @default.
• W2169209858 type Work @default.
• W2169209858 sameAs 2169209858 @default.
• W2169209858 citedByCount "88" @default.
• W2169209858 countsByYear W21692098582012 @default.
• W2169209858 countsByYear W21692098582013 @default.
• W2169209858 countsByYear W21692098582014 @default.
• W2169209858 countsByYear W21692098582015 @default.
• W2169209858 countsByYear W21692098582016 @default.
• W2169209858 countsByYear W21692098582017 @default.
• W2169209858 countsByYear W21692098582018 @default.
• W2169209858 countsByYear W21692098582019 @default.
• W2169209858 countsByYear W21692098582020 @default.
• W2169209858 countsByYear W21692098582021 @default.
• W2169209858 crossrefType "journal-article" @default.
• W2169209858 hasAuthorship W2169209858A5014444168 @default.
• W2169209858 hasAuthorship W2169209858A5024030384 @default.
• W2169209858 hasAuthorship W2169209858A5039204103 @default.
• W2169209858 hasAuthorship W2169209858A5050199826 @default.
• W2169209858 hasBestOaLocation W21692098581 @default.
• W2169209858 hasConcept C104317684 @default.
• W2169209858 hasConcept C106131492 @default.
• W2169209858 hasConcept C140779682 @default.
• W2169209858 hasConcept C18903297 @default.
• W2169209858 hasConcept C193252679 @default.

• next