FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2280207768> ?p ?o ?g. }

• W2280207768 endingPage "66" @default.
• W2280207768 startingPage "51" @default.
• W2280207768 abstract "We present an assessment of 'template-free modeling' (FM) in CASP11and ROLL. Community-wide server performance suggested the use of automated scores similar to previous CASPs would provide a good system of evaluating performance, even in the absence of comprehensive manual assessment. The CASP11 FM category included several outstanding examples, including successful prediction by the Baker group of a 256-residue target (T0806-D1) that lacked sequence similarity to any existing template. The top server model prediction by Zhang's Quark, which was apparently selected and refined by several manual groups, encompassed the entire fold of target T0837-D1. Methods from the same two groups tended to dominate overall CASP11 FM and ROLL rankings. Comparison of top FM predictions with those from the previous CASP experiment revealed progress in the category, particularly reflected in high prediction accuracy for larger protein domains. FM prediction models for two cases were sufficient to provide functional insights that were otherwise not obtainable by traditional sequence analysis methods. Importantly, CASP11 abstracts revealed that alignment-based contact prediction methods brought about much of the CASP11 progress, producing both of the functionally relevant models as well as several of the other outstanding structure predictions. These methodological advances enabled de novo modeling of much larger domain structures than was previously possible and allowed prediction of functional sites. Proteins 2016; 84(Suppl 1):51-66. © 2015 Wiley Periodicals, Inc." @default.
• W2280207768 created "2016-06-24" @default.
• W2280207768 creator A5020133148 @default.
• W2280207768 creator A5039591575 @default.
• W2280207768 creator A5046112262 @default.
• W2280207768 creator A5048271521 @default.
• W2280207768 creator A5063408550 @default.
• W2280207768 date "2016-01-20" @default.
• W2280207768 modified "2023-10-18" @default.
• W2280207768 title "Evaluation of free modeling targets in CASP11 and ROLL" @default.
• W2280207768 cites W1548178570 @default.
• W2280207768 cites W1946569870 @default.
• W2280207768 cites W1965827393 @default.
• W2280207768 cites W2060791849 @default.
• W2280207768 cites W2097744604 @default.
• W2280207768 cites W2098487344 @default.
• W2280207768 cites W2100856169 @default.
• W2280207768 cites W2108994789 @default.
• W2280207768 cites W2110483430 @default.
• W2280207768 cites W2115864800 @default.
• W2280207768 cites W2130280638 @default.
• W2280207768 cites W2130479394 @default.
• W2280207768 cites W2132275076 @default.
• W2280207768 cites W2134504420 @default.
• W2280207768 cites W2136393974 @default.
• W2280207768 cites W2140673705 @default.
• W2280207768 cites W2141120048 @default.
• W2280207768 cites W2154106236 @default.
• W2280207768 cites W2154714625 @default.
• W2280207768 cites W2157398953 @default.
• W2280207768 cites W2158996088 @default.
• W2280207768 cites W2161596896 @default.
• W2280207768 cites W2165667682 @default.
• W2280207768 cites W2171559274 @default.
• W2280207768 doi "https://doi.org/10.1002/prot.24973" @default.
• W2280207768 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5576440" @default.
• W2280207768 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/26677002" @default.
• W2280207768 hasPublicationYear "2016" @default.
• W2280207768 type Work @default.
• W2280207768 sameAs 2280207768 @default.
• W2280207768 citedByCount "67" @default.
• W2280207768 countsByYear W22802077682016 @default.
• W2280207768 countsByYear W22802077682017 @default.
• W2280207768 countsByYear W22802077682018 @default.
• W2280207768 countsByYear W22802077682019 @default.
• W2280207768 countsByYear W22802077682020 @default.
• W2280207768 countsByYear W22802077682021 @default.
• W2280207768 countsByYear W22802077682022 @default.
• W2280207768 countsByYear W22802077682023 @default.
• W2280207768 crossrefType "journal-article" @default.
• W2280207768 hasAuthorship W2280207768A5020133148 @default.
• W2280207768 hasAuthorship W2280207768A5039591575 @default.
• W2280207768 hasAuthorship W2280207768A5046112262 @default.
• W2280207768 hasAuthorship W2280207768A5048271521 @default.
• W2280207768 hasAuthorship W2280207768A5063408550 @default.
• W2280207768 hasBestOaLocation W22802077681 @default.
• W2280207768 hasConcept C103278499 @default.
• W2280207768 hasConcept C115961682 @default.
• W2280207768 hasConcept C124101348 @default.
• W2280207768 hasConcept C154945302 @default.
• W2280207768 hasConcept C18051474 @default.
• W2280207768 hasConcept C199360897 @default.
• W2280207768 hasConcept C2777904410 @default.
• W2280207768 hasConcept C2778112365 @default.
• W2280207768 hasConcept C41008148 @default.
• W2280207768 hasConcept C47701112 @default.
• W2280207768 hasConcept C54355233 @default.
• W2280207768 hasConcept C55493867 @default.
• W2280207768 hasConcept C66153294 @default.
• W2280207768 hasConcept C82714645 @default.
• W2280207768 hasConcept C86803240 @default.
• W2280207768 hasConceptScore W2280207768C103278499 @default.
• W2280207768 hasConceptScore W2280207768C115961682 @default.
• W2280207768 hasConceptScore W2280207768C124101348 @default.
• W2280207768 hasConceptScore W2280207768C154945302 @default.
• W2280207768 hasConceptScore W2280207768C18051474 @default.
• W2280207768 hasConceptScore W2280207768C199360897 @default.
• W2280207768 hasConceptScore W2280207768C2777904410 @default.
• W2280207768 hasConceptScore W2280207768C2778112365 @default.
• W2280207768 hasConceptScore W2280207768C41008148 @default.
• W2280207768 hasConceptScore W2280207768C47701112 @default.
• W2280207768 hasConceptScore W2280207768C54355233 @default.
• W2280207768 hasConceptScore W2280207768C55493867 @default.
• W2280207768 hasConceptScore W2280207768C66153294 @default.
• W2280207768 hasConceptScore W2280207768C82714645 @default.
• W2280207768 hasConceptScore W2280207768C86803240 @default.
• W2280207768 hasLocation W22802077681 @default.
• W2280207768 hasLocation W22802077682 @default.
• W2280207768 hasLocation W22802077683 @default.
• W2280207768 hasLocation W22802077684 @default.
• W2280207768 hasOpenAccess W2280207768 @default.
• W2280207768 hasPrimaryLocation W22802077681 @default.
• W2280207768 hasRelatedWork W2117340986 @default.
• W2280207768 hasRelatedWork W2119550029 @default.
• W2280207768 hasRelatedWork W2163176800 @default.
• W2280207768 hasRelatedWork W2411847509 @default.
• W2280207768 hasRelatedWork W2987451562 @default.
• W2280207768 hasRelatedWork W3023334178 @default.

• next