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• W2283214880 abstract "Cotton is an economically important crop that provides both natural fiber and by-products such as oil and protein. Its global gene expression could provide insight into the biological processes underlying growth and development, which involve suites of genes expressed with temporal and spatial control by regulatory networks. Generally, the goal for cotton breeding is improvement of the fiber; thus, most previous research has focused on identifying genes specific to the fiber. However, seeds may also play an important role in fiber development. In this study, we constructed and systematically analyzed 21 strand-specific RNA-Seq libraries for Gossypium hirsutum, covering different tissues, organs and development stages, from which approximately 970 million reads were generated to provide a global view of gene expression during cotton development. The organ (tissue)-specific gene expression patterns were investigated, providing further insight into the dynamic programming associated with developmental processes and a way to study the coordination of development between fiber cells and ovules. Series of transcription factors and seed-specific genes have been identified as candidate genes that could elucidate key mechanisms and regulatory networks in nutrient accumulation during ovule development and in fiber development. This study reports comprehensive transcriptome dynamics at various stages of cotton development and will serve as a valuable genome-wide transcriptome resource for initial gene discovery and functional characterization of genes in cotton." @default.
• W2283214880 created "2016-06-24" @default.
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• W2283214880 date "2016-04-06" @default.
• W2283214880 modified "2023-09-23" @default.
• W2283214880 title "Global analysis of the developmental dynamics ofGossypium hirsutumbased on strand-specific transcriptome" @default.
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• W2283214880 doi "https://doi.org/10.1111/ppl.12432" @default.
• W2283214880 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/26892265" @default.
• W2283214880 hasPublicationYear "2016" @default.
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