Matches in SemOpenAlex for { <https://semopenalex.org/work/W2327155213> ?p ?o ?g. }
- W2327155213 abstract "The exocarp, or skin, of fleshy fruit is a specialized tissue that protects the fruit, attracts seed dispersing fruit eaters, and has large economical relevance for fruit quality. Development of the exocarp involves regulated activities of many genes. This research analyzed global gene expression in the exocarp of developing sweet cherry (Prunus avium L., 'Regina'), a fruit crop species with little public genomic resources. A catalog of transcript models (contigs) representing expressed genes was constructed from de novo assembled short complementary DNA (cDNA) sequences generated from developing fruit between flowering and maturity at 14 time points. Expression levels in each sample were estimated for 34 695 contigs from numbers of reads mapping to each contig. Contigs were annotated functionally based on BLAST, gene ontology and InterProScan analyses. Coregulated genes were detected using partitional clustering of expression patterns. The results are discussed with emphasis on genes putatively involved in cuticle deposition, cell wall metabolism and sugar transport. The high temporal resolution of the expression patterns presented here reveals finely tuned developmental specialization of individual members of gene families. Moreover, the de novo assembled sweet cherry fruit transcriptome with 7760 full-length protein coding sequences and over 20 000 other, annotated cDNA sequences together with their developmental expression patterns is expected to accelerate molecular research on this important tree fruit crop." @default.
- W2327155213 created "2016-06-24" @default.
- W2327155213 creator A5056605640 @default.
- W2327155213 creator A5063708973 @default.
- W2327155213 creator A5066169839 @default.
- W2327155213 creator A5066812801 @default.
- W2327155213 creator A5066893582 @default.
- W2327155213 date "2014-03-12" @default.
- W2327155213 modified "2023-10-17" @default.
- W2327155213 title "Transcriptional dynamics of the developing sweet cherry (Prunus avium L.) fruit: sequencing, annotation and expression profiling of exocarp-associated genes" @default.
- W2327155213 cites W1584902126 @default.
- W2327155213 cites W164402501 @default.
- W2327155213 cites W1966460834 @default.
- W2327155213 cites W1980073252 @default.
- W2327155213 cites W1986752839 @default.
- W2327155213 cites W1986927422 @default.
- W2327155213 cites W1992512552 @default.
- W2327155213 cites W1994145712 @default.
- W2327155213 cites W1995724539 @default.
- W2327155213 cites W1996223187 @default.
- W2327155213 cites W1997405626 @default.
- W2327155213 cites W1999780947 @default.
- W2327155213 cites W2001396309 @default.
- W2327155213 cites W2010941976 @default.
- W2327155213 cites W2011440516 @default.
- W2327155213 cites W2015964007 @default.
- W2327155213 cites W2022366078 @default.
- W2327155213 cites W2027105072 @default.
- W2327155213 cites W2028743956 @default.
- W2327155213 cites W2029674986 @default.
- W2327155213 cites W2035188403 @default.
- W2327155213 cites W2035411290 @default.
- W2327155213 cites W2042243380 @default.
- W2327155213 cites W2042348092 @default.
- W2327155213 cites W2045894961 @default.
- W2327155213 cites W2046800185 @default.
- W2327155213 cites W2058017806 @default.
- W2327155213 cites W2059137444 @default.
- W2327155213 cites W2060531604 @default.
- W2327155213 cites W2065535635 @default.
- W2327155213 cites W2065815984 @default.
- W2327155213 cites W2071295619 @default.
- W2327155213 cites W2076364463 @default.
- W2327155213 cites W2077203181 @default.
- W2327155213 cites W2089299716 @default.
- W2327155213 cites W2090989521 @default.
- W2327155213 cites W2095428544 @default.
- W2327155213 cites W2098850807 @default.
- W2327155213 cites W2099052138 @default.
- W2327155213 cites W2099499565 @default.
- W2327155213 cites W2101065700 @default.
- W2327155213 cites W2104104670 @default.
- W2327155213 cites W2107915254 @default.
- W2327155213 cites W2107954823 @default.
- W2327155213 cites W2108649941 @default.
- W2327155213 cites W2109435033 @default.
- W2327155213 cites W2118513869 @default.
- W2327155213 cites W2119034410 @default.
- W2327155213 cites W2119226623 @default.
- W2327155213 cites W2124351063 @default.
- W2327155213 cites W2124985265 @default.
- W2327155213 cites W2125701547 @default.
- W2327155213 cites W2127516852 @default.
- W2327155213 cites W2129877426 @default.
- W2327155213 cites W2136090457 @default.
- W2327155213 cites W2138255003 @default.
- W2327155213 cites W2141085225 @default.
- W2327155213 cites W2141099859 @default.
- W2327155213 cites W2141292707 @default.
- W2327155213 cites W2141458291 @default.
- W2327155213 cites W2141810718 @default.
- W2327155213 cites W2147085096 @default.
- W2327155213 cites W2153033909 @default.
- W2327155213 cites W2153929630 @default.
- W2327155213 cites W2154144130 @default.
- W2327155213 cites W2156419730 @default.
- W2327155213 cites W2158714788 @default.
- W2327155213 cites W2159185114 @default.
- W2327155213 cites W2159517819 @default.
- W2327155213 cites W2160665949 @default.
- W2327155213 cites W2160969485 @default.
- W2327155213 cites W2161179461 @default.
- W2327155213 cites W2163132655 @default.
- W2327155213 cites W2163699174 @default.
- W2327155213 cites W2164154943 @default.
- W2327155213 cites W2164567932 @default.
- W2327155213 cites W2164819229 @default.
- W2327155213 cites W2166166363 @default.
- W2327155213 cites W2166265186 @default.
- W2327155213 cites W2167865654 @default.
- W2327155213 cites W2171167395 @default.
- W2327155213 cites W2171451182 @default.
- W2327155213 cites W2186890504 @default.
- W2327155213 cites W2189427325 @default.
- W2327155213 cites W2500310978 @default.
- W2327155213 cites W4233334497 @default.
- W2327155213 cites W640260889 @default.
- W2327155213 doi "https://doi.org/10.1038/hortres.2014.11" @default.
- W2327155213 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4591669" @default.
- W2327155213 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/26504533" @default.