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- W2389055592 abstract "A growing body of research indicates that gene content and order are frequently conserved among related plant species.Previously,a transcript map with 110 tentative consensus sequences(TCs) throughout the soybean genome was constructed using a recombinant inbred line(RIL) population.To estimate the level of synteny between Glycine max(soybean)-Lotus japanicus(L.japanicus) and between soybean-Arabidopsis traliana(A.tranliana),we used these soybean TC sequences as a basis for searching all available L.japanicus TAC sequences and A.thaliana sequences in GenBank using BLASTn.Thirty-nine out of 110 TCs on soybean genetic map showed significant similarity to L.jananicus and 8 putative smaller blocks of synteny were identified.Even between soybean and A.thaliana,which diverged at least 90 million years ago,we were able to detect some instances of sequence homology and several regions of synteny.The locus in soybean often had homologs on more than one A.thaliana chromosomes,indicating the fact that the A.thaliana genome has experienced extensive segmental duplication.The identified synteny between soybean-L.japanicus and soybean-A.thaliana was limited only to small genetic intervals.This may be due to the genome duplication(polyploidization) followed by gene loss and segmental reshuffling(diploidization),making it difficult to identify lengthy stretches of syntenic chromosome segments between soybean and related species." @default.
- W2389055592 created "2016-06-24" @default.
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- W2389055592 date "2008-01-01" @default.
- W2389055592 modified "2023-09-25" @default.
- W2389055592 title "Comparative Genomic Analysis between Soybean-Lotus japonicus and Between Soybean-Arabidopsis thaliana" @default.
- W2389055592 hasPublicationYear "2008" @default.
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