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- W2410001360 abstract "Electron transfers within and between protein complexes are core processes of the electron transport chains occurring in thylakoid (chloroplast), mitochondrial, and bacterial membranes. These electron transfers involve a number of cofactors. Here we describe the derivation of molecular mechanics parameters for the cofactors associated with the function of the photosystem II core complex: plastoquinone, plastoquinol, heme b, chlorophyll A, pheophytin, and β-carotene. Parameters were also obtained for ubiquinol and ubiquinone, related cofactors involved in the respiratory chain. Parameters were derived at both atomistic and coarse grain (CG) resolutions, compatible with the building blocks of the GROMOS united-atom and Martini CG force fields, respectively. Structural and thermodynamic properties of the cofactors were compared to experimental values when available. The topologies were further tested in molecular dynamics simulations of the cofactors in their physiological environment, e.g., either in a lipid membrane environment or in complex with the heme binding protein bacterioferritin." @default.
- W2410001360 created "2016-06-24" @default.
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- W2410001360 date "2015-06-08" @default.
- W2410001360 modified "2023-10-12" @default.
- W2410001360 title "Atomistic and Coarse Grain Topologies for the Cofactors Associated with the Photosystem II Core Complex" @default.
- W2410001360 cites W1541037889 @default.
- W2410001360 cites W1963807673 @default.
- W2410001360 cites W1966078827 @default.
- W2410001360 cites W1967688689 @default.
- W2410001360 cites W1970870612 @default.
- W2410001360 cites W1973428197 @default.
- W2410001360 cites W1975909362 @default.
- W2410001360 cites W1998185554 @default.
- W2410001360 cites W2007616467 @default.
- W2410001360 cites W2020116600 @default.
- W2410001360 cites W2022950330 @default.
- W2410001360 cites W2024849029 @default.
- W2410001360 cites W2027154929 @default.
- W2410001360 cites W2035187551 @default.
- W2410001360 cites W2035266068 @default.
- W2410001360 cites W2037788435 @default.
- W2410001360 cites W2037993052 @default.
- W2410001360 cites W2044414180 @default.
- W2410001360 cites W2044481897 @default.
- W2410001360 cites W2049286183 @default.
- W2410001360 cites W2051864856 @default.
- W2410001360 cites W2052121400 @default.
- W2410001360 cites W2052797854 @default.
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- W2410001360 cites W2062190671 @default.
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- W2410001360 cites W2081260116 @default.
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- W2410001360 doi "https://doi.org/10.1021/acs.jpcb.5b00809" @default.
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