FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2413595570> ?p ?o ?g. }

• W2413595570 endingPage "e2844" @default.
• W2413595570 startingPage "e2844" @default.
• W2413595570 abstract "Solar salterns are excellent model ecosystems for studying virus-microbial interactions because of their low microbial diversity, environmental stability, and high viral density. By using the power of CRISPR spacers to link viruses to their prokaryotic hosts, we explored virus-host interactions in geographically diverse salterns. Using taxonomic profiling, we identified hosts such as archaeal Haloquadratum , Halorubrum , and Haloarcula and bacterial Salinibacter , and we found that community composition related to not only salinity but also local environmental dynamics. Characterizing glycerol metabolism genes in these metagenomes suggested Halorubrum and Haloquadratum possess most dihydroxyacetone kinase genes while Salinibacter possesses most glycerol-3-phosphate dehydrogenase genes. Using two different methods, we detected fewer CRISPR spacers in Haloquadratum -dominated compared with Halobacteriaceae-dominated saltern metagenomes. After CRISPR detection, spacers were aligned against haloviral genomes to map virus to host. While most alignments for each saltern metagenome linked viruses to Haloquadratum walsbyi , there were also alignments indicating interactions with the low abundance taxa Haloarcula and Haloferax . Further examination of the dinucleotide and trinucleotide usage differences between paired viruses and their hosts confirmed viruses and hosts had similar nucleotide usage signatures. Detection of cas genes in the salterns supported the possibility of CRISPR activity. Taken together, our studies suggest similar virus-host interactions exist in different solar salterns and that the glycerol metabolism gene dihydroxyacetone kinase is associated with Haloquadratum and Halorubrum ." @default.
• W2413595570 created "2016-06-24" @default.
• W2413595570 creator A5019556892 @default.
• W2413595570 creator A5048048979 @default.
• W2413595570 date "2017-01-10" @default.
• W2413595570 modified "2023-10-16" @default.
• W2413595570 title "Determining virus-host interactions and glycerol metabolism profiles in geographically diverse solar salterns with metagenomics" @default.
• W2413595570 cites W1531183196 @default.
• W2413595570 cites W1547146305 @default.
• W2413595570 cites W1552724685 @default.
• W2413595570 cites W1563631267 @default.
• W2413595570 cites W1822482735 @default.
• W2413595570 cites W1858154647 @default.
• W2413595570 cites W1898463343 @default.
• W2413595570 cites W1936995073 @default.
• W2413595570 cites W1965404910 @default.
• W2413595570 cites W1965527800 @default.
• W2413595570 cites W1978039093 @default.
• W2413595570 cites W1989130729 @default.
• W2413595570 cites W1993657382 @default.
• W2413595570 cites W1994421736 @default.
• W2413595570 cites W2000589358 @default.
• W2413595570 cites W2002871448 @default.
• W2413595570 cites W2010332428 @default.
• W2413595570 cites W2010636153 @default.
• W2413595570 cites W2016945008 @default.
• W2413595570 cites W2020114132 @default.
• W2413595570 cites W2021818638 @default.
• W2413595570 cites W2029467110 @default.
• W2413595570 cites W2030652467 @default.
• W2413595570 cites W2044390539 @default.
• W2413595570 cites W2046466283 @default.
• W2413595570 cites W2046806099 @default.
• W2413595570 cites W2047692070 @default.
• W2413595570 cites W2055043387 @default.
• W2413595570 cites W2056638759 @default.
• W2413595570 cites W2057525759 @default.
• W2413595570 cites W2057948727 @default.
• W2413595570 cites W2060573994 @default.
• W2413595570 cites W2064146176 @default.
• W2413595570 cites W2068051418 @default.
• W2413595570 cites W2075170426 @default.
• W2413595570 cites W2076248826 @default.
• W2413595570 cites W2076620665 @default.
• W2413595570 cites W2084382408 @default.
• W2413595570 cites W2092076137 @default.
• W2413595570 cites W2109676064 @default.
• W2413595570 cites W2109777529 @default.
• W2413595570 cites W2111867163 @default.
• W2413595570 cites W2126184219 @default.
• W2413595570 cites W2138116029 @default.
• W2413595570 cites W2147338491 @default.
• W2413595570 cites W2147531155 @default.
• W2413595570 cites W2148158563 @default.
• W2413595570 cites W2149167091 @default.
• W2413595570 cites W2154186763 @default.
• W2413595570 cites W2156125289 @default.
• W2413595570 cites W2157408920 @default.
• W2413595570 cites W2157929204 @default.
• W2413595570 cites W2159675211 @default.
• W2413595570 cites W2160969485 @default.
• W2413595570 cites W2163481728 @default.
• W2413595570 cites W2165255936 @default.
• W2413595570 cites W2170829941 @default.
• W2413595570 cites W2171776631 @default.
• W2413595570 cites W2172245649 @default.
• W2413595570 cites W2173503307 @default.
• W2413595570 cites W2245444176 @default.
• W2413595570 cites W2335196113 @default.
• W2413595570 cites W2476759866 @default.
• W2413595570 cites W4239778503 @default.
• W2413595570 cites W4256107661 @default.
• W2413595570 cites W650200004 @default.
• W2413595570 cites W818404457 @default.
• W2413595570 doi "https://doi.org/10.7717/peerj.2844" @default.
• W2413595570 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5228507" @default.
• W2413595570 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28097058" @default.
• W2413595570 hasPublicationYear "2017" @default.
• W2413595570 type Work @default.
• W2413595570 sameAs 2413595570 @default.
• W2413595570 citedByCount "4" @default.
• W2413595570 countsByYear W24135955702017 @default.
• W2413595570 countsByYear W24135955702018 @default.
• W2413595570 countsByYear W24135955702019 @default.
• W2413595570 countsByYear W24135955702020 @default.
• W2413595570 crossrefType "journal-article" @default.
• W2413595570 hasAuthorship W2413595570A5019556892 @default.
• W2413595570 hasAuthorship W2413595570A5048048979 @default.
• W2413595570 hasBestOaLocation W24135955701 @default.
• W2413595570 hasConcept C104317684 @default.
• W2413595570 hasConcept C15151743 @default.
• W2413595570 hasConcept C2780282346 @default.
• W2413595570 hasConcept C54355233 @default.
• W2413595570 hasConcept C86803240 @default.
• W2413595570 hasConcept C98108389 @default.
• W2413595570 hasConceptScore W2413595570C104317684 @default.
• W2413595570 hasConceptScore W2413595570C15151743 @default.
• W2413595570 hasConceptScore W2413595570C2780282346 @default.

• next