Matches in SemOpenAlex for { <https://semopenalex.org/work/W2415120971> ?p ?o ?g. }
- W2415120971 endingPage "e0156633" @default.
- W2415120971 startingPage "e0156633" @default.
- W2415120971 abstract "Microsatellite or simple sequence repeat (SSR) is one of the most widely distributed molecular markers that have been widely utilized to assess genetic diversity and genetic mapping for important traits in plants. However, the understanding of microsatellite characteristics in Arachis species and the currently available amount of high-quality SSR markers remain limited. In this study, we identified 16,435 genome survey sequences SSRs (GSS-SSRs) and 40,199 expressed sequence tag SSRs (EST-SSRs) in Arachis hypogaea and its wild relative species using the publicly available sequence data. The GSS-SSRs had a density of 159.9–239.8 SSRs/Mb for wild Arachis and 1,015.8 SSR/Mb for cultivated Arachis, whereas the EST-SSRs had the density of 173.5–384.4 SSR/Mb and 250.9 SSRs/Mb for wild and cultivated Arachis, respectively. The trinucleotide SSRs were predominant across Arachis species, except that the dinucleotide accounted for most in A. hypogaea GSSs. From Arachis GSS-SSR and EST-SSR sequences, we developed 2,589 novel SSR markers that showed a high polymorphism in six diverse A. hypogaea accessions. A genetic linkage map that contained 540 novel SSR loci and 105 anchor SSR loci was constructed by case of a recombinant inbred lines F6 population. A subset of 82 randomly selected SSR markers were used to screen 39 wild and 22 cultivated Arachis accessions, which revealed a high transferability of the novel SSRs across Arachis species. Our results provided informative clues to investigate microsatellite patterns across A. hypogaea and its wild relative species and potentially facilitate the germplasm evaluation and gene mapping in Arachis species." @default.
- W2415120971 created "2016-06-24" @default.
- W2415120971 creator A5008926113 @default.
- W2415120971 creator A5023901988 @default.
- W2415120971 creator A5024888678 @default.
- W2415120971 creator A5033502541 @default.
- W2415120971 creator A5054562979 @default.
- W2415120971 creator A5056182966 @default.
- W2415120971 creator A5059767560 @default.
- W2415120971 creator A5069345263 @default.
- W2415120971 creator A5071744960 @default.
- W2415120971 creator A5085032833 @default.
- W2415120971 creator A5086475030 @default.
- W2415120971 creator A5087625797 @default.
- W2415120971 date "2016-05-31" @default.
- W2415120971 modified "2023-10-11" @default.
- W2415120971 title "Characterization and Transferable Utility of Microsatellite Markers in the Wild and Cultivated Arachis Species" @default.
- W2415120971 cites W1485221699 @default.
- W2415120971 cites W1499500424 @default.
- W2415120971 cites W1541630946 @default.
- W2415120971 cites W1984995974 @default.
- W2415120971 cites W1988182864 @default.
- W2415120971 cites W1998474383 @default.
- W2415120971 cites W2005458361 @default.
- W2415120971 cites W2015022706 @default.
- W2415120971 cites W2024611655 @default.
- W2415120971 cites W2030573276 @default.
- W2415120971 cites W2044838123 @default.
- W2415120971 cites W2047869388 @default.
- W2415120971 cites W2048439260 @default.
- W2415120971 cites W2063960552 @default.
- W2415120971 cites W2066571832 @default.
- W2415120971 cites W2076657055 @default.
- W2415120971 cites W2086573417 @default.
- W2415120971 cites W2087169593 @default.
- W2415120971 cites W2088510619 @default.
- W2415120971 cites W2093344660 @default.
- W2415120971 cites W2095802249 @default.
- W2415120971 cites W2100476087 @default.
- W2415120971 cites W2101505342 @default.
- W2415120971 cites W2105594462 @default.
- W2415120971 cites W2105858384 @default.
- W2415120971 cites W2122459053 @default.
- W2415120971 cites W2123742849 @default.
- W2415120971 cites W2125121305 @default.
- W2415120971 cites W2125588390 @default.
- W2415120971 cites W2132139074 @default.
- W2415120971 cites W2141616651 @default.
- W2415120971 cites W2142946715 @default.
- W2415120971 cites W2147873336 @default.
- W2415120971 cites W2148590655 @default.
- W2415120971 cites W2158148243 @default.
- W2415120971 cites W2165359657 @default.
- W2415120971 cites W2169449045 @default.
- W2415120971 cites W218380392 @default.
- W2415120971 cites W2231339909 @default.
- W2415120971 cites W3142709630 @default.
- W2415120971 cites W4231986617 @default.
- W2415120971 cites W4256491199 @default.
- W2415120971 cites W4376567118 @default.
- W2415120971 cites W590269612 @default.
- W2415120971 cites W615625878 @default.
- W2415120971 doi "https://doi.org/10.1371/journal.pone.0156633" @default.
- W2415120971 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/4887017" @default.
- W2415120971 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/27243460" @default.
- W2415120971 hasPublicationYear "2016" @default.
- W2415120971 type Work @default.
- W2415120971 sameAs 2415120971 @default.
- W2415120971 citedByCount "18" @default.
- W2415120971 countsByYear W24151209712016 @default.
- W2415120971 countsByYear W24151209712017 @default.
- W2415120971 countsByYear W24151209712018 @default.
- W2415120971 countsByYear W24151209712019 @default.
- W2415120971 countsByYear W24151209712020 @default.
- W2415120971 countsByYear W24151209712021 @default.
- W2415120971 countsByYear W24151209712022 @default.
- W2415120971 crossrefType "journal-article" @default.
- W2415120971 hasAuthorship W2415120971A5008926113 @default.
- W2415120971 hasAuthorship W2415120971A5023901988 @default.
- W2415120971 hasAuthorship W2415120971A5024888678 @default.
- W2415120971 hasAuthorship W2415120971A5033502541 @default.
- W2415120971 hasAuthorship W2415120971A5054562979 @default.
- W2415120971 hasAuthorship W2415120971A5056182966 @default.
- W2415120971 hasAuthorship W2415120971A5059767560 @default.
- W2415120971 hasAuthorship W2415120971A5069345263 @default.
- W2415120971 hasAuthorship W2415120971A5071744960 @default.
- W2415120971 hasAuthorship W2415120971A5085032833 @default.
- W2415120971 hasAuthorship W2415120971A5086475030 @default.
- W2415120971 hasAuthorship W2415120971A5087625797 @default.
- W2415120971 hasBestOaLocation W24151209711 @default.
- W2415120971 hasConcept C104317684 @default.
- W2415120971 hasConcept C141231307 @default.
- W2415120971 hasConcept C144024400 @default.
- W2415120971 hasConcept C149034497 @default.
- W2415120971 hasConcept C149923435 @default.
- W2415120971 hasConcept C180754005 @default.
- W2415120971 hasConcept C190789776 @default.
- W2415120971 hasConcept C2776156084 @default.