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- W2419567799 abstract "Encapsulation of in vitro biochemical reaction circuits into small, cell-sized compartments can result in considerable variations in the dynamical properties of the circuits. As a model system, we here investigate a simple in vitro transcriptional reaction circuit, which generates an ultrasensitive fluorescence response when the concentration of an RNA transcript reaches a preset threshold. The reaction circuit is compartmentalized into spherical water-in-oil microemulsion droplets, and the reaction progress is monitored by fluorescence microscopy. A quantitative statistical analysis of thousands of individual droplets ranging in size from a few up to 20 μm reveals a strong variability in effective RNA production rates, which by computational modeling is traced back to a larger-than-Poisson variability in RNAP activities in the droplets. The noise level in terms of the noise strength (the Fano factor) is strongly dependent on the ratio between transcription templates and polymerases, and increases for higher template concentrations." @default.
- W2419567799 created "2016-06-24" @default.
- W2419567799 creator A5074924918 @default.
- W2419567799 creator A5078278469 @default.
- W2419567799 date "2015-05-22" @default.
- W2419567799 modified "2023-09-25" @default.
- W2419567799 title "Partitioning Variability of a Compartmentalized <i>In Vitro</i> Transcriptional Thresholding Circuit" @default.
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- W2419567799 doi "https://doi.org/10.1021/acssynbio.5b00051" @default.
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- W2419567799 hasPublicationYear "2015" @default.
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