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• W2514184689 abstract "We explore the thermodynamic geometry of a simple system that models the bistable dynamics of nucleic acid hairpins in single molecule force-extension experiments. Near equilibrium, optimal (minimum-dissipation) driving protocols are governed by a generalized linear response friction coefficient. Our analysis and simulations demonstrate that the friction coefficient of the driving protocols is sharply peaked at the interface between metastable regions, which leads to minimum-dissipation protocols that drive rapidly within a metastable basin, but then linger longest at the interface, giving thermal fluctuations maximal time to kick the system over the barrier. Intuitively, the same principle applies generically in free energy estimation (both in steered molecular dynamics simulations and in single-molecule experiments), provides a design principle for the construction of thermodynamically efficient coupling between stochastic objects, and makes a prediction regarding the construction of evolved biomolecular motors." @default.
• W2514184689 created "2016-09-16" @default.
• W2514184689 creator A5005809960 @default.
• W2514184689 creator A5056143270 @default.
• W2514184689 date "2016-11-03" @default.
• W2514184689 modified "2023-10-12" @default.
• W2514184689 title "Thermodynamic geometry of minimum-dissipation driven barrier crossing" @default.
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• W2514184689 doi "https://doi.org/10.1103/physreve.94.052106" @default.
• W2514184689 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/27967045" @default.
• W2514184689 hasPublicationYear "2016" @default.
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