Matches in SemOpenAlex for { <https://semopenalex.org/work/W251575285> ?p ?o ?g. }
Showing items 1 to 77 of
77
with 100 items per page.
- W251575285 abstract "The XSQ (eXtensible SeQuence) format was designed to accommodate different run types (standard SOLiD sequencing and exact chemistry call (ECC) runs), simplify indexing samples workflow and support new data types such as ECC in the new 5500 sequencing instrument; these data cannot be stored in any existing formats (e.g. csfasta & QV.qual) as there are more than one call per position. Other problems with existing formats are the file size, I/O demand, and lack of pairing of reads. The XSQ format uses information packing to reduce the file size by 60%, resulting in reduced storage needs and reduced transfer times. It also has integrated pairing of reads, so mapping and pairing can happen together much more quickly, rather than having the two reads of a pair mapped separately and then merged subsequently. The new XSQ file allows users to perform very efficient indexing reassignment and such reassignment only introduces minimal impact to downstream analysis instead of reanalyzing all indexing samples. The hierarchical data format also provides a basic level of partitioning and indexing within the file so that subsets of the data can be retrieved without reading through the entire file." @default.
- W251575285 created "2016-06-24" @default.
- W251575285 creator A5018673539 @default.
- W251575285 creator A5066990838 @default.
- W251575285 creator A5084475809 @default.
- W251575285 creator A5070734651 @default.
- W251575285 date "2011-10-01" @default.
- W251575285 modified "2023-09-22" @default.
- W251575285 title "XSQ: A New Binary Output Format of 5500/5500XL Systems" @default.
- W251575285 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/3186646" @default.
- W251575285 hasPublicationYear "2011" @default.
- W251575285 type Work @default.
- W251575285 sameAs 251575285 @default.
- W251575285 citedByCount "0" @default.
- W251575285 crossrefType "journal-article" @default.
- W251575285 hasAuthorship W251575285A5018673539 @default.
- W251575285 hasAuthorship W251575285A5066990838 @default.
- W251575285 hasAuthorship W251575285A5070734651 @default.
- W251575285 hasAuthorship W251575285A5084475809 @default.
- W251575285 hasConcept C124101348 @default.
- W251575285 hasConcept C166807848 @default.
- W251575285 hasConcept C171730128 @default.
- W251575285 hasConcept C177212765 @default.
- W251575285 hasConcept C193769178 @default.
- W251575285 hasConcept C201743585 @default.
- W251575285 hasConcept C23123220 @default.
- W251575285 hasConcept C2778112365 @default.
- W251575285 hasConcept C41008148 @default.
- W251575285 hasConcept C54355233 @default.
- W251575285 hasConcept C75165309 @default.
- W251575285 hasConcept C77088390 @default.
- W251575285 hasConcept C86803240 @default.
- W251575285 hasConcept C95637964 @default.
- W251575285 hasConcept C97250363 @default.
- W251575285 hasConceptScore W251575285C124101348 @default.
- W251575285 hasConceptScore W251575285C166807848 @default.
- W251575285 hasConceptScore W251575285C171730128 @default.
- W251575285 hasConceptScore W251575285C177212765 @default.
- W251575285 hasConceptScore W251575285C193769178 @default.
- W251575285 hasConceptScore W251575285C201743585 @default.
- W251575285 hasConceptScore W251575285C23123220 @default.
- W251575285 hasConceptScore W251575285C2778112365 @default.
- W251575285 hasConceptScore W251575285C41008148 @default.
- W251575285 hasConceptScore W251575285C54355233 @default.
- W251575285 hasConceptScore W251575285C75165309 @default.
- W251575285 hasConceptScore W251575285C77088390 @default.
- W251575285 hasConceptScore W251575285C86803240 @default.
- W251575285 hasConceptScore W251575285C95637964 @default.
- W251575285 hasConceptScore W251575285C97250363 @default.
- W251575285 hasLocation W2515752851 @default.
- W251575285 hasOpenAccess W251575285 @default.
- W251575285 hasPrimaryLocation W2515752851 @default.
- W251575285 hasRelatedWork W153120804 @default.
- W251575285 hasRelatedWork W1897192510 @default.
- W251575285 hasRelatedWork W1966326070 @default.
- W251575285 hasRelatedWork W1970676032 @default.
- W251575285 hasRelatedWork W2014048173 @default.
- W251575285 hasRelatedWork W2026546793 @default.
- W251575285 hasRelatedWork W2060305193 @default.
- W251575285 hasRelatedWork W2079968985 @default.
- W251575285 hasRelatedWork W2088863666 @default.
- W251575285 hasRelatedWork W2166044213 @default.
- W251575285 hasRelatedWork W2537020829 @default.
- W251575285 hasRelatedWork W3099161928 @default.
- W251575285 hasRelatedWork W3206924155 @default.
- W251575285 hasRelatedWork W69554571 @default.
- W251575285 hasRelatedWork W97847609 @default.
- W251575285 hasRelatedWork W2283049850 @default.
- W251575285 hasRelatedWork W2403806221 @default.
- W251575285 hasRelatedWork W2548534107 @default.
- W251575285 hasRelatedWork W3019178096 @default.
- W251575285 hasRelatedWork W332431639 @default.
- W251575285 hasVolume "22" @default.
- W251575285 isParatext "false" @default.
- W251575285 isRetracted "false" @default.
- W251575285 magId "251575285" @default.
- W251575285 workType "article" @default.