FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2522948376> ?p ?o ?g. }

• W2522948376 endingPage "e1005112" @default.
• W2522948376 startingPage "e1005112" @default.
• W2522948376 abstract "Single-cell mass cytometry significantly increases the dimensionality of cytometry analysis as compared to fluorescence flow cytometry, providing unprecedented resolution of cellular diversity in tissues. However, analysis and interpretation of these high-dimensional data poses a significant technical challenge. Here, we present cytofkit, a new Bioconductor package, which integrates both state-of-the-art bioinformatics methods and in-house novel algorithms to offer a comprehensive toolset for mass cytometry data analysis. Cytofkit provides functions for data pre-processing, data visualization through linear or non-linear dimensionality reduction, automatic identification of cell subsets, and inference of the relatedness between cell subsets. This pipeline also provides a graphical user interface (GUI) for ease of use, as well as a shiny application (APP) for interactive visualization of cell subpopulations and progression profiles of key markers. Applied to a CD14-CD19- PBMCs dataset, cytofkit accurately identified different subsets of lymphocytes; applied to a human CD4+ T cell dataset, cytofkit uncovered multiple subtypes of TFH cells spanning blood and tonsils. Cytofkit is implemented in R, licensed under the Artistic license 2.0, and freely available from the Bioconductor website, https://bioconductor.org/packages/cytofkit/. Cytofkit is also applicable for flow cytometry data analysis." @default.
• W2522948376 created "2016-09-30" @default.
• W2522948376 creator A5009692472 @default.
• W2522948376 creator A5011420562 @default.
• W2522948376 creator A5022499603 @default.
• W2522948376 creator A5050267398 @default.
• W2522948376 creator A5058587345 @default.
• W2522948376 creator A5060666271 @default.
• W2522948376 date "2016-09-23" @default.
• W2522948376 modified "2023-10-16" @default.
• W2522948376 title "Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline" @default.
• W2522948376 cites W1584972523 @default.
• W2522948376 cites W1631320694 @default.
• W2522948376 cites W1969456163 @default.
• W2522948376 cites W1970170720 @default.
• W2522948376 cites W1982729887 @default.
• W2522948376 cites W1984883254 @default.
• W2522948376 cites W1993287310 @default.
• W2522948376 cites W1993835819 @default.
• W2522948376 cites W1995424704 @default.
• W2522948376 cites W2001141328 @default.
• W2522948376 cites W2015671099 @default.
• W2522948376 cites W2024593848 @default.
• W2522948376 cites W2024626836 @default.
• W2522948376 cites W2038254572 @default.
• W2522948376 cites W2038426170 @default.
• W2522948376 cites W2047594345 @default.
• W2522948376 cites W2066930665 @default.
• W2522948376 cites W2070503238 @default.
• W2522948376 cites W2073256527 @default.
• W2522948376 cites W2095085751 @default.
• W2522948376 cites W2128120736 @default.
• W2522948376 cites W2140628770 @default.
• W2522948376 cites W2165835468 @default.
• W2522948376 cites W2169486228 @default.
• W2522948376 cites W2321361127 @default.
• W2522948376 cites W2344887288 @default.
• W2522948376 cites W2471791044 @default.
• W2522948376 doi "https://doi.org/10.1371/journal.pcbi.1005112" @default.
• W2522948376 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5035035" @default.
• W2522948376 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/27662185" @default.
• W2522948376 hasPublicationYear "2016" @default.
• W2522948376 type Work @default.
• W2522948376 sameAs 2522948376 @default.
• W2522948376 citedByCount "261" @default.
• W2522948376 countsByYear W25229483762016 @default.
• W2522948376 countsByYear W25229483762017 @default.
• W2522948376 countsByYear W25229483762018 @default.
• W2522948376 countsByYear W25229483762019 @default.
• W2522948376 countsByYear W25229483762020 @default.
• W2522948376 countsByYear W25229483762021 @default.
• W2522948376 countsByYear W25229483762022 @default.
• W2522948376 countsByYear W25229483762023 @default.
• W2522948376 crossrefType "journal-article" @default.
• W2522948376 hasAuthorship W2522948376A5009692472 @default.
• W2522948376 hasAuthorship W2522948376A5011420562 @default.
• W2522948376 hasAuthorship W2522948376A5022499603 @default.
• W2522948376 hasAuthorship W2522948376A5050267398 @default.
• W2522948376 hasAuthorship W2522948376A5058587345 @default.
• W2522948376 hasAuthorship W2522948376A5060666271 @default.
• W2522948376 hasBestOaLocation W25229483761 @default.
• W2522948376 hasConcept C104317684 @default.
• W2522948376 hasConcept C124101348 @default.
• W2522948376 hasConcept C127716648 @default.
• W2522948376 hasConcept C203014093 @default.
• W2522948376 hasConcept C2778015335 @default.
• W2522948376 hasConcept C2779694297 @default.
• W2522948376 hasConcept C2780339063 @default.
• W2522948376 hasConcept C2984074130 @default.
• W2522948376 hasConcept C36464697 @default.
• W2522948376 hasConcept C41008148 @default.
• W2522948376 hasConcept C459310 @default.
• W2522948376 hasConcept C553184892 @default.
• W2522948376 hasConcept C55493867 @default.
• W2522948376 hasConcept C70721500 @default.
• W2522948376 hasConcept C86803240 @default.
• W2522948376 hasConceptScore W2522948376C104317684 @default.
• W2522948376 hasConceptScore W2522948376C124101348 @default.
• W2522948376 hasConceptScore W2522948376C127716648 @default.
• W2522948376 hasConceptScore W2522948376C203014093 @default.
• W2522948376 hasConceptScore W2522948376C2778015335 @default.
• W2522948376 hasConceptScore W2522948376C2779694297 @default.
• W2522948376 hasConceptScore W2522948376C2780339063 @default.
• W2522948376 hasConceptScore W2522948376C2984074130 @default.
• W2522948376 hasConceptScore W2522948376C36464697 @default.
• W2522948376 hasConceptScore W2522948376C41008148 @default.
• W2522948376 hasConceptScore W2522948376C459310 @default.
• W2522948376 hasConceptScore W2522948376C553184892 @default.
• W2522948376 hasConceptScore W2522948376C55493867 @default.
• W2522948376 hasConceptScore W2522948376C70721500 @default.
• W2522948376 hasConceptScore W2522948376C86803240 @default.
• W2522948376 hasIssue "9" @default.
• W2522948376 hasLocation W25229483761 @default.
• W2522948376 hasLocation W25229483762 @default.
• W2522948376 hasLocation W25229483763 @default.
• W2522948376 hasLocation W25229483764 @default.
• W2522948376 hasLocation W25229483765 @default.
• W2522948376 hasOpenAccess W2522948376 @default.

• next