FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2542363764> ?p ?o ?g. }

• W2542363764 abstract "The majority of the subspecies of Daucus carota have not yet been discriminated clearly by various molecular or morphological methods and hence their phylogeny and classification remains unresolved. Recent studies using 94 nuclear orthologs and morphological characters, and studies employing other molecular approaches were unable to distinguish clearly many of the subspecies. Fertile intercrosses among traditionally recognized subspecies are well documented. We here explore the utility of single nucleotide polymorphisms (SNPs) generated by genotyping-by-sequencing (GBS) to serve as an effective molecular method to discriminate the subspecies of the D. carota complex. We used GBS to obtain SNPs covering all nine Daucus carota chromosomes from 162 accessions of Daucus and two related genera. To study Daucus phylogeny, we scored a total of 10,814 or 38,920 SNPs with a maximum of 10 or 30% missing data, respectively. To investigate the subspecies of D. carota, we employed two data sets including 150 accessions: (i) rate of missing data 10% with a total of 18,565 SNPs, and (ii) rate of missing data 30%, totaling 43,713 SNPs. Consistent with prior results, the topology of both data sets separated species with 2n = 18 chromosome from all other species. Our results place all cultivated carrots (D. carota subsp. sativus) in a single clade. The wild members of D. carota from central Asia were on a clade with eastern members of subsp. sativus. The other subspecies of D. carota were in four clades associated with geographic groups: (1) the Balkan Peninsula and the Middle East, (2) North America and Europe, (3) North Africa exclusive of Morocco, and (4) the Iberian Peninsula and Morocco. Daucus carota subsp. maximus was discriminated, but neither it, nor subsp. gummifer (defined in a broad sense) are monophyletic. Our study suggests that (1) the morphotypes identified as D. carota subspecies gummifer (as currently broadly circumscribed), all confined to areas near the Atlantic Ocean and the western Mediterranean Sea, have separate origins from sympatric members of other subspecies of D. carota, (2) D. carota subsp. maximus, on two clades with some accessions of subsp. carota, can be distinguished from each other but only with poor morphological support, (3) D. carota subsp. capillifolius, well distinguished morphologically, is an apospecies relative to North African populations of D. carota subsp. carota, (4) the eastern cultivated carrots have origins closer to wild carrots from central Asia than to western cultivated carrots, and (5) large SNP data sets are suitable for species-level phylogenetic studies in Daucus." @default.
• W2542363764 created "2016-11-04" @default.
• W2542363764 creator A5008240226 @default.
• W2542363764 creator A5055363037 @default.
• W2542363764 creator A5073669436 @default.
• W2542363764 creator A5077905540 @default.
• W2542363764 creator A5079887163 @default.
• W2542363764 date "2016-10-28" @default.
• W2542363764 modified "2023-10-12" @default.
• W2542363764 title "Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae)" @default.
• W2542363764 cites W1494644796 @default.
• W2542363764 cites W1664439142 @default.
• W2542363764 cites W1667758322 @default.
• W2542363764 cites W195017829 @default.
• W2542363764 cites W1969042907 @default.
• W2542363764 cites W1969322128 @default.
• W2542363764 cites W1972216668 @default.
• W2542363764 cites W1973732939 @default.
• W2542363764 cites W1980777164 @default.
• W2542363764 cites W1986481982 @default.
• W2542363764 cites W1988170736 @default.
• W2542363764 cites W1988363710 @default.
• W2542363764 cites W1989670827 @default.
• W2542363764 cites W2003254631 @default.
• W2542363764 cites W2005238069 @default.
• W2542363764 cites W2005925580 @default.
• W2542363764 cites W2007212839 @default.
• W2542363764 cites W2014509968 @default.
• W2542363764 cites W2018826821 @default.
• W2542363764 cites W2026374150 @default.
• W2542363764 cites W2034169167 @default.
• W2542363764 cites W2035317012 @default.
• W2542363764 cites W2035839217 @default.
• W2542363764 cites W2043897063 @default.
• W2542363764 cites W2044534398 @default.
• W2542363764 cites W2053657447 @default.
• W2542363764 cites W2054163738 @default.
• W2542363764 cites W2054355639 @default.
• W2542363764 cites W2059542829 @default.
• W2542363764 cites W2066327001 @default.
• W2542363764 cites W2067441490 @default.
• W2542363764 cites W2072504820 @default.
• W2542363764 cites W2075425860 @default.
• W2542363764 cites W2083015817 @default.
• W2542363764 cites W2085315239 @default.
• W2542363764 cites W2088482819 @default.
• W2542363764 cites W2089742939 @default.
• W2542363764 cites W2093279488 @default.
• W2542363764 cites W2094442049 @default.
• W2542363764 cites W2095406866 @default.
• W2542363764 cites W2098126593 @default.
• W2542363764 cites W2102707652 @default.
• W2542363764 cites W2103441770 @default.
• W2542363764 cites W2106260006 @default.
• W2542363764 cites W2107537542 @default.
• W2542363764 cites W2108524369 @default.
• W2542363764 cites W2108675949 @default.
• W2542363764 cites W2110035718 @default.
• W2542363764 cites W2112484080 @default.
• W2542363764 cites W2115580647 @default.
• W2542363764 cites W2120663060 @default.
• W2542363764 cites W2121512231 @default.
• W2542363764 cites W2125092464 @default.
• W2542363764 cites W2128252278 @default.
• W2542363764 cites W2130917423 @default.
• W2542363764 cites W2136353610 @default.
• W2542363764 cites W2140216649 @default.
• W2542363764 cites W2141052558 @default.
• W2542363764 cites W2142718629 @default.
• W2542363764 cites W2143633856 @default.
• W2542363764 cites W2144573758 @default.
• W2542363764 cites W2148248435 @default.
• W2542363764 cites W2148698435 @default.
• W2542363764 cites W2148966488 @default.
• W2542363764 cites W2149992227 @default.
• W2542363764 cites W2151571031 @default.
• W2542363764 cites W2156524622 @default.
• W2542363764 cites W2157205588 @default.
• W2542363764 cites W2158752901 @default.
• W2542363764 cites W2159474015 @default.
• W2542363764 cites W2161339576 @default.
• W2542363764 cites W2161633633 @default.
• W2542363764 cites W2162195154 @default.
• W2542363764 cites W2163659174 @default.
• W2542363764 cites W2165140440 @default.
• W2542363764 cites W2165289460 @default.
• W2542363764 cites W2167193190 @default.
• W2542363764 cites W2170187504 @default.
• W2542363764 cites W2172086791 @default.
• W2542363764 cites W2174889714 @default.
• W2542363764 cites W2176256193 @default.
• W2542363764 cites W2285665240 @default.
• W2542363764 cites W2323303653 @default.
• W2542363764 cites W2328401665 @default.
• W2542363764 cites W2346290259 @default.
• W2542363764 cites W2398124588 @default.
• W2542363764 cites W2419635576 @default.
• W2542363764 cites W2464785463 @default.
• W2542363764 cites W2469033122 @default.
• W2542363764 cites W2501440899 @default.

• next