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• W2564982803 abstract "Abstract Lotus japonicus is a well-characterized model legume widely used in the study of plant-microbe interactions. However, datasets from various Lotus studies are poorly integrated and lack interoperability. We recognize the need for a comprehensive repository that allows comprehensive and dynamic exploration of Lotus genomic and transcriptomic data. Equally important are user-friendly in-browser tools designed for data visualization and interpretation. Here, we present Lotus Base, which opens to the research community a large, established LORE1 insertion mutant population containing an excess of 120,000 lines, and serves the end-user tightly integrated data from Lotus , such as the reference genome, annotated proteins, and expression profiling data. We report the integration of expression data from the L. japonicus gene expression atlas project, and the development of tools to cluster and export such data, allowing users to construct, visualize, and annotate co-expression gene networks. Lotus Base takes advantage of modern advances in browser technology to deliver powerful data interpretation for biologists. Its modular construction and publicly available application programming interface enable developers to tap into the wealth of integrated Lotus data. Lotus Base is freely accessible at: https://lotus.au.dk ." @default.
• W2564982803 created "2017-01-06" @default.
• W2564982803 creator A5001984385 @default.
• W2564982803 creator A5053789411 @default.
• W2564982803 creator A5056309757 @default.
• W2564982803 creator A5060633945 @default.
• W2564982803 creator A5079422276 @default.
• W2564982803 date "2016-12-23" @default.
• W2564982803 modified "2023-10-16" @default.
• W2564982803 title "Lotus Base: An integrated information portal for the model legume Lotus japonicus" @default.
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• W2564982803 doi "https://doi.org/10.1038/srep39447" @default.
• W2564982803 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5180183" @default.
• W2564982803 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28008948" @default.

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