FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2585034134> ?p ?o ?g. }

• W2585034134 endingPage "e3569" @default.
• W2585034134 startingPage "e3569" @default.
• W2585034134 abstract "Targeted high-throughput sequencing using hybrid-enrichment offers a promising source of data for inferring multiple, meaningfully resolved, independent gene trees suitable to address challenging phylogenetic problems in species complexes and rapid radiations. The targets in question can either be adopted directly from more or less universal tools, or custom made for particular clades at considerably greater effort. We applied custom made scripts to select sets of homologous sequence markers from transcriptome and WGS data for use in the flowering plant genus Erica (Ericaceae). We compared the resulting targets to those that would be selected both using different available tools (Hyb-Seq; MarkerMiner), and when optimising for broader clades of more distantly related taxa (Ericales; eudicots). Approaches comparing more divergent genomes (including MarkerMiner, irrespective of input data) delivered fewer and shorter potential markers than those targeted for Erica . The latter may nevertheless be effective for sequence capture across the wider family Ericaceae. We tested the targets delivered by our scripts by obtaining an empirical dataset. The resulting sequence variation was lower than that of standard nuclear ribosomal markers (that in Erica fail to deliver a well resolved gene tree), confirming the importance of maximising the lengths of individual markers. We conclude that rather than searching for “one size fits all” universal markers, we should improve and make more accessible the tools necessary for developing “made to measure” ones." @default.
• W2585034134 created "2017-02-10" @default.
• W2585034134 creator A5013419514 @default.
• W2585034134 creator A5039467332 @default.
• W2585034134 creator A5045548117 @default.
• W2585034134 creator A5080558501 @default.
• W2585034134 date "2017-07-25" @default.
• W2585034134 modified "2023-09-30" @default.
• W2585034134 title "Targeted NGS for species level phylogenomics: “made to measure” or “one size fits all”?" @default.
• W2585034134 cites W1888392170 @default.
• W2585034134 cites W1922101003 @default.
• W2585034134 cites W1923209435 @default.
• W2585034134 cites W1970772660 @default.
• W2585034134 cites W1972160583 @default.
• W2585034134 cites W1973235805 @default.
• W2585034134 cites W1981509058 @default.
• W2585034134 cites W2012114194 @default.
• W2585034134 cites W2013277649 @default.
• W2585034134 cites W2020379996 @default.
• W2585034134 cites W2035628732 @default.
• W2585034134 cites W2045366837 @default.
• W2585034134 cites W2050717506 @default.
• W2585034134 cites W2066289589 @default.
• W2585034134 cites W2078841998 @default.
• W2585034134 cites W2083537563 @default.
• W2585034134 cites W2088830454 @default.
• W2585034134 cites W2095882149 @default.
• W2585034134 cites W2098357503 @default.
• W2585034134 cites W2102437944 @default.
• W2585034134 cites W2115567294 @default.
• W2585034134 cites W2119556995 @default.
• W2585034134 cites W2120644786 @default.
• W2585034134 cites W2121084440 @default.
• W2585034134 cites W2122302865 @default.
• W2585034134 cites W2122766746 @default.
• W2585034134 cites W2127774996 @default.
• W2585034134 cites W2130893024 @default.
• W2585034134 cites W2133980123 @default.
• W2585034134 cites W2134285566 @default.
• W2585034134 cites W2137157357 @default.
• W2585034134 cites W2138270253 @default.
• W2585034134 cites W2138514847 @default.
• W2585034134 cites W2139736670 @default.
• W2585034134 cites W2140216649 @default.
• W2585034134 cites W2141052558 @default.
• W2585034134 cites W2141374663 @default.
• W2585034134 cites W2145878592 @default.
• W2585034134 cites W2148535730 @default.
• W2585034134 cites W2158479085 @default.
• W2585034134 cites W2159474015 @default.
• W2585034134 cites W2163023674 @default.
• W2585034134 cites W2170071314 @default.
• W2585034134 cites W2173435961 @default.
• W2585034134 cites W2174083527 @default.
• W2585034134 cites W2177506452 @default.
• W2585034134 cites W2211592429 @default.
• W2585034134 cites W2256160122 @default.
• W2585034134 cites W2303008992 @default.
• W2585034134 cites W2319462502 @default.
• W2585034134 cites W2508301473 @default.
• W2585034134 cites W2519658587 @default.
• W2585034134 cites W2530102220 @default.
• W2585034134 cites W2546666212 @default.
• W2585034134 cites W2553561124 @default.
• W2585034134 cites W2579357734 @default.
• W2585034134 cites W2607411230 @default.
• W2585034134 cites W2623850875 @default.
• W2585034134 doi "https://doi.org/10.7717/peerj.3569" @default.
• W2585034134 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5530999" @default.
• W2585034134 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28761782" @default.
• W2585034134 hasPublicationYear "2017" @default.
• W2585034134 type Work @default.
• W2585034134 sameAs 2585034134 @default.
• W2585034134 citedByCount "42" @default.
• W2585034134 countsByYear W25850341342018 @default.
• W2585034134 countsByYear W25850341342019 @default.
• W2585034134 countsByYear W25850341342020 @default.
• W2585034134 countsByYear W25850341342021 @default.
• W2585034134 countsByYear W25850341342022 @default.
• W2585034134 countsByYear W25850341342023 @default.
• W2585034134 crossrefType "journal-article" @default.
• W2585034134 hasAuthorship W2585034134A5013419514 @default.
• W2585034134 hasAuthorship W2585034134A5039467332 @default.
• W2585034134 hasAuthorship W2585034134A5045548117 @default.
• W2585034134 hasAuthorship W2585034134A5080558501 @default.
• W2585034134 hasBestOaLocation W25850341341 @default.
• W2585034134 hasConcept C104317684 @default.
• W2585034134 hasConcept C141231307 @default.
• W2585034134 hasConcept C18903297 @default.
• W2585034134 hasConcept C193252679 @default.
• W2585034134 hasConcept C2781221326 @default.
• W2585034134 hasConcept C44465124 @default.
• W2585034134 hasConcept C54355233 @default.
• W2585034134 hasConcept C70343354 @default.
• W2585034134 hasConcept C70721500 @default.
• W2585034134 hasConcept C78458016 @default.
• W2585034134 hasConcept C86803240 @default.
• W2585034134 hasConceptScore W2585034134C104317684 @default.

• next