Matches in SemOpenAlex for { <https://semopenalex.org/work/W2594923308> ?p ?o ?g. }
- W2594923308 abstract "Simian foamy viruses (SFVs) infect most nonhuman primate species and appears to co-evolve with its hosts. This co-evolutionary signal is particularly strong among great apes, including orangutans (genus Pongo). Previous studies have identified three distinct orangutan SFV clades. The first of these three clades is composed of SFV from P. abelii from Sumatra, the second consists of SFV from P. pygmaeus from Borneo, while the third clade is mixed, comprising an SFV strain found in both species of orangutan. The existence of the mixed clade has been attributed to an expansion of P. pygmaeus into Sumatra following the Mount Toba super-volcanic eruption about 73,000years ago. Divergence dating, however, has yet to be performed to establish a temporal association with the Toba eruption. Here, we use a Bayesian framework and a relaxed molecular clock model with fossil calibrations to test the Toba hypothesis and to gain a more complete understanding of the evolutionary history of orangutan SFV. As with previous studies, our results show a similar three-clade orangutan SFV phylogeny, along with strong statistical support for SFV-host co-evolution in orangutans. Using Bayesian inference, we date the origin of orangutan SFV to >4.7 million years ago (mya), while the mixed species clade dates to approximately 1.7mya, >1.6 million years older than the Toba super-eruption. These results, combined with fossil and paleogeographic evidence, suggest that the origin of SFV in Sumatran and Bornean orangutans, including the mixed species clade, likely occurred on the mainland of Indo-China during the Late Pliocene and Calabrian stage of the Pleistocene, respectively." @default.
- W2594923308 created "2017-03-16" @default.
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- W2594923308 date "2017-07-01" @default.
- W2594923308 modified "2023-10-16" @default.
- W2594923308 title "Bayesian inference reveals ancient origin of simian foamy virus in orangutans" @default.
- W2594923308 cites W1613994480 @default.
- W2594923308 cites W1911873048 @default.
- W2594923308 cites W1964362218 @default.
- W2594923308 cites W1967316505 @default.
- W2594923308 cites W1967504082 @default.
- W2594923308 cites W1969042907 @default.
- W2594923308 cites W1971114913 @default.
- W2594923308 cites W1972826893 @default.
- W2594923308 cites W1974420184 @default.
- W2594923308 cites W1975276003 @default.
- W2594923308 cites W1980713405 @default.
- W2594923308 cites W1983272644 @default.
- W2594923308 cites W1989350663 @default.
- W2594923308 cites W1992467106 @default.
- W2594923308 cites W1995311901 @default.
- W2594923308 cites W1999001885 @default.
- W2594923308 cites W2005476360 @default.
- W2594923308 cites W2005586406 @default.
- W2594923308 cites W2008292925 @default.
- W2594923308 cites W2009596137 @default.
- W2594923308 cites W2009636807 @default.
- W2594923308 cites W2012389392 @default.
- W2594923308 cites W2014817498 @default.
- W2594923308 cites W2022303059 @default.
- W2594923308 cites W2026062398 @default.
- W2594923308 cites W2030226179 @default.
- W2594923308 cites W2031027485 @default.
- W2594923308 cites W2035867588 @default.
- W2594923308 cites W2040155323 @default.
- W2594923308 cites W2046338383 @default.
- W2594923308 cites W2046772718 @default.
- W2594923308 cites W2052219130 @default.
- W2594923308 cites W2052639207 @default.
- W2594923308 cites W2056151446 @default.
- W2594923308 cites W2057453884 @default.
- W2594923308 cites W2063751049 @default.
- W2594923308 cites W2063886057 @default.
- W2594923308 cites W2070450821 @default.
- W2594923308 cites W2070556077 @default.
- W2594923308 cites W2074145359 @default.
- W2594923308 cites W2076424822 @default.
- W2594923308 cites W2077004998 @default.
- W2594923308 cites W2090324482 @default.
- W2594923308 cites W2090329795 @default.
- W2594923308 cites W2091475088 @default.
- W2594923308 cites W2092258147 @default.
- W2594923308 cites W2094886018 @default.
- W2594923308 cites W2096363667 @default.
- W2594923308 cites W2102502076 @default.
- W2594923308 cites W2103546861 @default.
- W2594923308 cites W2108472810 @default.
- W2594923308 cites W2112218396 @default.
- W2594923308 cites W2117761852 @default.
- W2594923308 cites W2120403551 @default.
- W2594923308 cites W2120611093 @default.
- W2594923308 cites W2124033968 @default.
- W2594923308 cites W2124489846 @default.
- W2594923308 cites W2127926918 @default.
- W2594923308 cites W2130310941 @default.
- W2594923308 cites W2138798117 @default.
- W2594923308 cites W2139290202 @default.
- W2594923308 cites W2141008678 @default.
- W2594923308 cites W2142513285 @default.
- W2594923308 cites W2144812106 @default.
- W2594923308 cites W2144820135 @default.
- W2594923308 cites W2150551033 @default.
- W2594923308 cites W2152207030 @default.
- W2594923308 cites W2157473180 @default.
- W2594923308 cites W2160378127 @default.
- W2594923308 cites W2162351311 @default.
- W2594923308 cites W2162744507 @default.
- W2594923308 cites W2168064401 @default.
- W2594923308 cites W2168745915 @default.
- W2594923308 cites W2169014040 @default.
- W2594923308 cites W2169975480 @default.
- W2594923308 cites W2188009694 @default.
- W2594923308 cites W4206871293 @default.
- W2594923308 doi "https://doi.org/10.1016/j.meegid.2017.03.003" @default.
- W2594923308 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28274887" @default.
- W2594923308 hasPublicationYear "2017" @default.
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