FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2595594329> ?p ?o ?g. }

• W2595594329 abstract "Because the rice genome has been sequenced entirely, search to find specific features at genome-wide scale is of high importance for studying genome evolution and subsequent applications. Palindromic sequences are important DNA motifs involved in the regulation of different cellular processes and are a potential source of genetic instability. A genome mining approach was applied to detect and characterize the long palindromic sequences in the rice genome. All palindromes, defined as identical inverted repeats with spacer DNA, could be analyzed and sorted according to their frequency, size, GC content, compact index etc. The results showed that the overall palindrome frequency is high in rice genome (nearly 51000 palindromes), that totally cover 41.4% of nuclear genome of rice, with highest and lowest number of palindromes, respectively belongs to chromosome 1 and 12. Palindrome number could well explain the rice chromosome expansion (R2>92%). Average GC content of the palindromic sequences is 42.1%, indicating AT-richness and hence, the low-complexity of palindromic sequences. The results also showed different compact indices of palindromes in different chromosomes (43.2 per cM in chromosome 8 and 34.5 per cM in chromosome 3, as highest and lowest, respectively). Co-location analysis showed that more than 20% of rice genes overlapped with palindromic regions, mainly concentrating on chromosomal arms. Based on the results of this research it can be concluded that the rice genome is rich in long palindromic sequences that triggered most variation during evolution. Generally, both sections of palindromic sequences including stems and loops are AT-rich, indicating that these regions locate in the low-complexity segments of the rice chromosomes." @default.
• W2595594329 created "2017-03-23" @default.
• W2595594329 creator A5058322859 @default.
• W2595594329 creator A5074731342 @default.
• W2595594329 date "2016-01-01" @default.
• W2595594329 modified "2023-09-29" @default.
• W2595594329 title "Genome Mining of Rice (Oryza sativa subsp. indica) for Detection and Characterization of Long Palindromic Sequences" @default.
• W2595594329 cites W1498512229 @default.
• W2595594329 cites W1867964494 @default.
• W2595594329 cites W1902452511 @default.
• W2595594329 cites W1990053038 @default.
• W2595594329 cites W1997369952 @default.
• W2595594329 cites W1999801882 @default.
• W2595594329 cites W2008991558 @default.
• W2595594329 cites W2010904948 @default.
• W2595594329 cites W2014704298 @default.
• W2595594329 cites W2026575204 @default.
• W2595594329 cites W2027171056 @default.
• W2595594329 cites W2033587361 @default.
• W2595594329 cites W2038992136 @default.
• W2595594329 cites W2041367556 @default.
• W2595594329 cites W2043257525 @default.
• W2595594329 cites W2071405543 @default.
• W2595594329 cites W2079093304 @default.
• W2595594329 cites W2080171457 @default.
• W2595594329 cites W2080654590 @default.
• W2595594329 cites W2088489316 @default.
• W2595594329 cites W2096087610 @default.
• W2595594329 cites W2114179812 @default.
• W2595594329 cites W2116113182 @default.
• W2595594329 cites W2124493864 @default.
• W2595594329 cites W2124778052 @default.
• W2595594329 cites W2134871921 @default.
• W2595594329 cites W2141272722 @default.
• W2595594329 cites W2149459456 @default.
• W2595594329 cites W2150781353 @default.
• W2595594329 cites W2161121955 @default.
• W2595594329 cites W2161817820 @default.
• W2595594329 cites W2162383089 @default.
• W2595594329 cites W2166281646 @default.
• W2595594329 cites W2168909179 @default.
• W2595594329 cites W2171787842 @default.
• W2595594329 cites W2186908390 @default.
• W2595594329 doi "https://doi.org/10.4172/2153-0602.1000199" @default.
• W2595594329 hasPublicationYear "2016" @default.
• W2595594329 type Work @default.
• W2595594329 sameAs 2595594329 @default.
• W2595594329 citedByCount "2" @default.
• W2595594329 countsByYear W25955943292016 @default.
• W2595594329 countsByYear W25955943292020 @default.
• W2595594329 crossrefType "journal-article" @default.
• W2595594329 hasAuthorship W2595594329A5058322859 @default.
• W2595594329 hasAuthorship W2595594329A5074731342 @default.
• W2595594329 hasBestOaLocation W25955943291 @default.
• W2595594329 hasConcept C104317684 @default.
• W2595594329 hasConcept C141231307 @default.
• W2595594329 hasConcept C24432333 @default.
• W2595594329 hasConcept C2778543611 @default.
• W2595594329 hasConcept C30481170 @default.
• W2595594329 hasConcept C44667518 @default.
• W2595594329 hasConcept C51603236 @default.
• W2595594329 hasConcept C51679486 @default.
• W2595594329 hasConcept C54355233 @default.
• W2595594329 hasConcept C61271108 @default.
• W2595594329 hasConcept C76557 @default.
• W2595594329 hasConcept C86803240 @default.
• W2595594329 hasConceptScore W2595594329C104317684 @default.
• W2595594329 hasConceptScore W2595594329C141231307 @default.
• W2595594329 hasConceptScore W2595594329C24432333 @default.
• W2595594329 hasConceptScore W2595594329C2778543611 @default.
• W2595594329 hasConceptScore W2595594329C30481170 @default.
• W2595594329 hasConceptScore W2595594329C44667518 @default.
• W2595594329 hasConceptScore W2595594329C51603236 @default.
• W2595594329 hasConceptScore W2595594329C51679486 @default.
• W2595594329 hasConceptScore W2595594329C54355233 @default.
• W2595594329 hasConceptScore W2595594329C61271108 @default.
• W2595594329 hasConceptScore W2595594329C76557 @default.
• W2595594329 hasConceptScore W2595594329C86803240 @default.
• W2595594329 hasLocation W25955943291 @default.
• W2595594329 hasOpenAccess W2595594329 @default.
• W2595594329 hasPrimaryLocation W25955943291 @default.
• W2595594329 hasRelatedWork W2287303020 @default.
• W2595594329 hasRelatedWork W2325949238 @default.
• W2595594329 hasRelatedWork W2409218448 @default.
• W2595594329 hasRelatedWork W2463141796 @default.
• W2595594329 hasRelatedWork W2513332114 @default.
• W2595594329 hasRelatedWork W2534836911 @default.
• W2595594329 hasRelatedWork W2547817923 @default.
• W2595594329 hasRelatedWork W2569332536 @default.
• W2595594329 hasRelatedWork W2585822349 @default.
• W2595594329 hasRelatedWork W2591891771 @default.
• W2595594329 hasRelatedWork W2592452393 @default.
• W2595594329 hasRelatedWork W2621220284 @default.
• W2595594329 hasRelatedWork W2734466041 @default.
• W2595594329 hasRelatedWork W2770251751 @default.
• W2595594329 hasRelatedWork W2773340138 @default.
• W2595594329 hasRelatedWork W2782704405 @default.
• W2595594329 hasRelatedWork W2788917294 @default.
• W2595594329 hasRelatedWork W2800192556 @default.
• W2595594329 hasRelatedWork W2886863705 @default.

• next