FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2600803309> ?p ?o ?g. }

• W2600803309 endingPage "61" @default.
• W2600803309 startingPage "58" @default.
• W2600803309 abstract "The contraction and relaxation events of the muscle is mediated by the coordination of many important calcium cycling proteins of ryanodine receptor (RYR), troponin C (TNNC), parvalbumin (PVALB), sarcoendoplasmic reticulum calcium transport ATPase (SERCA) and calsequestrin (CASQ). In higher vertebrates, the expression level of calcium cycling proteins are positively correlated to the muscle contraction/relaxation ability of the cell. In this study, we used RNAseq to explore the expression profile of calcium cycling genes between two marine fish of Bombay duck (Harpadon nehereus) and beltfish (Trichiurus lepturus) with poor and robust swimming activities, respectively. We have studied the hypothesis whether the expression level of calcium cycling proteins are also positive correlated to swimming ability in fish. We used Illumina sequencing technology (NextSeq500) to sequence, assemble and annotate the muscle transcriptome of Bombay duck for the first time. A total of 47,752,240 cleaned reads (deposited in NCBI SRA database with accession number of SRX1706379) were obtained from RNA sequencing and 26,288 unigenes (with N50 of 486 bp) were obtained after de novo assembling with Trinity software. BLASTX against NR, GO, KEGG and eggNOG databases show 100%, 65%, 26%, 94% and 88% annotation rate, respectively. Comparison of the dominantly expressed unigenes in fish muscle shows calcium cycling gene expression in beltfish (SRX1674471) is 1.4- to 51.6-fold higher than Bombay duck. Among five calcium cycling genes, the fold change results are very significant in CASQ (51.6 fold) and PVALB (9.1 fold) and both of them are responsive for calcium binding to reduce free calcium concentration in the sarcoendoplasmic reticulum and cytoplasm. In conclusion, we confirmed that the high abundant expression rate of calcium cycling genes in robust swimming fish species. The current muscle transcriptome and identified calcium cycling gene data can provide more insights into the muscle physiology of fish." @default.
• W2600803309 created "2017-04-07" @default.
• W2600803309 creator A5018386605 @default.
• W2600803309 creator A5036375676 @default.
• W2600803309 creator A5046020341 @default.
• W2600803309 creator A5049346557 @default.
• W2600803309 creator A5055996804 @default.
• W2600803309 creator A5066382802 @default.
• W2600803309 date "2017-06-01" @default.
• W2600803309 modified "2023-10-17" @default.
• W2600803309 title "Comparative study the expression of calcium cycling genes in Bombay duck ( Harpadon nehereus ) and beltfish ( Trichiurus lepturus ) with different swimming activities" @default.
• W2600803309 cites W1997272729 @default.
• W2600803309 cites W1999574084 @default.
• W2600803309 cites W2011657487 @default.
• W2600803309 cites W2019435811 @default.
• W2600803309 cites W2036897871 @default.
• W2600803309 cites W2048867275 @default.
• W2600803309 cites W2063509536 @default.
• W2600803309 cites W2122403406 @default.
• W2600803309 cites W2154976310 @default.
• W2600803309 cites W2164154943 @default.
• W2600803309 cites W2170551349 @default.
• W2600803309 cites W2170579633 @default.
• W2600803309 cites W2316446689 @default.
• W2600803309 cites W2336064292 @default.
• W2600803309 doi "https://doi.org/10.1016/j.gdata.2017.03.003" @default.
• W2600803309 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5367804" @default.
• W2600803309 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28373957" @default.
• W2600803309 hasPublicationYear "2017" @default.
• W2600803309 type Work @default.
• W2600803309 sameAs 2600803309 @default.
• W2600803309 citedByCount "13" @default.
• W2600803309 countsByYear W26008033092020 @default.
• W2600803309 countsByYear W26008033092021 @default.
• W2600803309 countsByYear W26008033092022 @default.
• W2600803309 crossrefType "journal-article" @default.
• W2600803309 hasAuthorship W2600803309A5018386605 @default.
• W2600803309 hasAuthorship W2600803309A5036375676 @default.
• W2600803309 hasAuthorship W2600803309A5046020341 @default.
• W2600803309 hasAuthorship W2600803309A5049346557 @default.
• W2600803309 hasAuthorship W2600803309A5055996804 @default.
• W2600803309 hasAuthorship W2600803309A5066382802 @default.
• W2600803309 hasBestOaLocation W26008033091 @default.
• W2600803309 hasConcept C104317684 @default.
• W2600803309 hasConcept C113217602 @default.
• W2600803309 hasConcept C126322002 @default.
• W2600803309 hasConcept C150194340 @default.
• W2600803309 hasConcept C158617107 @default.
• W2600803309 hasConcept C162317418 @default.
• W2600803309 hasConcept C181199279 @default.
• W2600803309 hasConcept C2775953344 @default.
• W2600803309 hasConcept C29688787 @default.
• W2600803309 hasConcept C519063684 @default.
• W2600803309 hasConcept C54355233 @default.
• W2600803309 hasConcept C55493867 @default.
• W2600803309 hasConcept C71924100 @default.
• W2600803309 hasConcept C86803240 @default.
• W2600803309 hasConceptScore W2600803309C104317684 @default.
• W2600803309 hasConceptScore W2600803309C113217602 @default.
• W2600803309 hasConceptScore W2600803309C126322002 @default.
• W2600803309 hasConceptScore W2600803309C150194340 @default.
• W2600803309 hasConceptScore W2600803309C158617107 @default.
• W2600803309 hasConceptScore W2600803309C162317418 @default.
• W2600803309 hasConceptScore W2600803309C181199279 @default.
• W2600803309 hasConceptScore W2600803309C2775953344 @default.
• W2600803309 hasConceptScore W2600803309C29688787 @default.
• W2600803309 hasConceptScore W2600803309C519063684 @default.
• W2600803309 hasConceptScore W2600803309C54355233 @default.
• W2600803309 hasConceptScore W2600803309C55493867 @default.
• W2600803309 hasConceptScore W2600803309C71924100 @default.
• W2600803309 hasConceptScore W2600803309C86803240 @default.
• W2600803309 hasFunder F4320321001 @default.
• W2600803309 hasLocation W26008033091 @default.
• W2600803309 hasLocation W26008033092 @default.
• W2600803309 hasLocation W26008033093 @default.
• W2600803309 hasLocation W26008033094 @default.
• W2600803309 hasOpenAccess W2600803309 @default.
• W2600803309 hasPrimaryLocation W26008033091 @default.
• W2600803309 hasRelatedWork W1533171224 @default.
• W2600803309 hasRelatedWork W1980245772 @default.
• W2600803309 hasRelatedWork W1994681182 @default.
• W2600803309 hasRelatedWork W2039543463 @default.
• W2600803309 hasRelatedWork W2041995412 @default.
• W2600803309 hasRelatedWork W2073352540 @default.
• W2600803309 hasRelatedWork W2095062180 @default.
• W2600803309 hasRelatedWork W2235943107 @default.
• W2600803309 hasRelatedWork W2414760327 @default.
• W2600803309 hasRelatedWork W2740974664 @default.
• W2600803309 hasVolume "12" @default.
• W2600803309 isParatext "false" @default.
• W2600803309 isRetracted "false" @default.
• W2600803309 magId "2600803309" @default.
• W2600803309 workType "article" @default.