Matches in SemOpenAlex for { <https://semopenalex.org/work/W2618258036> ?p ?o ?g. }
- W2618258036 abstract "Abstract Auxin plays a pivotal role in virtually every aspect of plant morphogenesis. It simultaneously orchestrates a diverse variety of processes such as cell wall biogenesis, transition through the cell cycle, or metabolism of a wide range of chemical substances. The coordination principles for such a complex orchestration are poorly understood at the systems level. Here, we perform an RNA-seq experiment to study the transcriptional response to auxin treatment within gene groups of different biological processes, molecular functions, or cell components in a quantitative fold-change-specific manner. We find for Arabidopsis thaliana roots treated with auxin for 6 h that (i) there are functional groups within which genes respond to auxin with a surprisingly similar fold changes and that (ii) these fold changes vary from one group to another. These findings make it tempting to conjecture the existence of some transcriptional logic orchestrating the coordinated expression of genes within functional groups in a fold-change-specific manner. To obtain some initial insight about this coordinated expression, we performed a motif enrichment analysis and found cis-regulatory elements TBX1-3, SBX, REG, and TCP/site2 as the candidates conferring fold-change-specific responses to auxin in Arabidopsis thaliana ." @default.
- W2618258036 created "2017-06-05" @default.
- W2618258036 creator A5016147403 @default.
- W2618258036 creator A5017744726 @default.
- W2618258036 creator A5023123648 @default.
- W2618258036 creator A5038764591 @default.
- W2618258036 creator A5042966440 @default.
- W2618258036 creator A5043822218 @default.
- W2618258036 creator A5048329342 @default.
- W2618258036 creator A5052654415 @default.
- W2618258036 creator A5053694878 @default.
- W2618258036 creator A5062514262 @default.
- W2618258036 creator A5083849566 @default.
- W2618258036 creator A5089243975 @default.
- W2618258036 creator A5090987957 @default.
- W2618258036 date "2017-05-30" @default.
- W2618258036 modified "2023-10-10" @default.
- W2618258036 title "Auxin regulates functional gene groups in a fold-change-specific manner in Arabidopsis thaliana roots" @default.
- W2618258036 cites W1975294571 @default.
- W2618258036 cites W1991105447 @default.
- W2618258036 cites W1992512552 @default.
- W2618258036 cites W2008807830 @default.
- W2618258036 cites W2018306071 @default.
- W2618258036 cites W2025529750 @default.
- W2618258036 cites W2027349511 @default.
- W2618258036 cites W2034226898 @default.
- W2618258036 cites W2039725641 @default.
- W2618258036 cites W2045228806 @default.
- W2618258036 cites W2048449962 @default.
- W2618258036 cites W2051434262 @default.
- W2618258036 cites W2056780622 @default.
- W2618258036 cites W2063117095 @default.
- W2618258036 cites W2076947759 @default.
- W2618258036 cites W2092321617 @default.
- W2618258036 cites W2092806862 @default.
- W2618258036 cites W2101851382 @default.
- W2618258036 cites W2103017472 @default.
- W2618258036 cites W2114632020 @default.
- W2618258036 cites W2115800530 @default.
- W2618258036 cites W2118353834 @default.
- W2618258036 cites W2121293397 @default.
- W2618258036 cites W2135279128 @default.
- W2618258036 cites W2137236730 @default.
- W2618258036 cites W2139454201 @default.
- W2618258036 cites W2140154634 @default.
- W2618258036 cites W2151499142 @default.
- W2618258036 cites W2152239989 @default.
- W2618258036 cites W2158217645 @default.
- W2618258036 cites W2190054407 @default.
- W2618258036 cites W2191679689 @default.
- W2618258036 cites W2279275813 @default.
- W2618258036 cites W2300662113 @default.
- W2618258036 cites W4205372329 @default.
- W2618258036 cites W598051865 @default.
- W2618258036 doi "https://doi.org/10.1038/s41598-017-02476-8" @default.
- W2618258036 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5449405" @default.
- W2618258036 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28559568" @default.
- W2618258036 hasPublicationYear "2017" @default.
- W2618258036 type Work @default.
- W2618258036 sameAs 2618258036 @default.
- W2618258036 citedByCount "22" @default.
- W2618258036 countsByYear W26182580362017 @default.
- W2618258036 countsByYear W26182580362018 @default.
- W2618258036 countsByYear W26182580362019 @default.
- W2618258036 countsByYear W26182580362020 @default.
- W2618258036 countsByYear W26182580362021 @default.
- W2618258036 countsByYear W26182580362022 @default.
- W2618258036 countsByYear W26182580362023 @default.
- W2618258036 crossrefType "journal-article" @default.
- W2618258036 hasAuthorship W2618258036A5016147403 @default.
- W2618258036 hasAuthorship W2618258036A5017744726 @default.
- W2618258036 hasAuthorship W2618258036A5023123648 @default.
- W2618258036 hasAuthorship W2618258036A5038764591 @default.
- W2618258036 hasAuthorship W2618258036A5042966440 @default.
- W2618258036 hasAuthorship W2618258036A5043822218 @default.
- W2618258036 hasAuthorship W2618258036A5048329342 @default.
- W2618258036 hasAuthorship W2618258036A5052654415 @default.
- W2618258036 hasAuthorship W2618258036A5053694878 @default.
- W2618258036 hasAuthorship W2618258036A5062514262 @default.
- W2618258036 hasAuthorship W2618258036A5083849566 @default.
- W2618258036 hasAuthorship W2618258036A5089243975 @default.
- W2618258036 hasAuthorship W2618258036A5090987957 @default.
- W2618258036 hasBestOaLocation W26182580361 @default.
- W2618258036 hasConcept C104317684 @default.
- W2618258036 hasConcept C131934819 @default.
- W2618258036 hasConcept C143065580 @default.
- W2618258036 hasConcept C150194340 @default.
- W2618258036 hasConcept C165864922 @default.
- W2618258036 hasConcept C207778908 @default.
- W2618258036 hasConcept C2775988993 @default.
- W2618258036 hasConcept C2779491563 @default.
- W2618258036 hasConcept C54355233 @default.
- W2618258036 hasConcept C86803240 @default.
- W2618258036 hasConcept C95444343 @default.
- W2618258036 hasConceptScore W2618258036C104317684 @default.
- W2618258036 hasConceptScore W2618258036C131934819 @default.
- W2618258036 hasConceptScore W2618258036C143065580 @default.
- W2618258036 hasConceptScore W2618258036C150194340 @default.
- W2618258036 hasConceptScore W2618258036C165864922 @default.
- W2618258036 hasConceptScore W2618258036C207778908 @default.