Matches in SemOpenAlex for { <https://semopenalex.org/work/W2743402317> ?p ?o ?g. }
Showing items 1 to 96 of
96
with 100 items per page.
- W2743402317 endingPage "3496" @default.
- W2743402317 startingPage "3495" @default.
- W2743402317 abstract "Abstract Motivation The bisulfite sequencing technology has been widely used to study the DNA methylation profile in many species. However, most of the current visualization tools for bisulfite sequencing data only provide high-level views (i.e. overall methylation densities) while miss the methylation dynamics at nucleotide level. Meanwhile, they also focus on CpG sites while omit other information (such as genotypes on SNP sites) which could be helpful for interpreting the methylation pattern of the data. A bioinformatics tool that visualizes the methylation statuses at nucleotide level and preserves the most essential information of the sequencing data is thus valuable and needed. Results We have developed BSviewer, a lightweight nucleotide-level visualization tool for bisulfite sequencing data. Using an imprinting gene as an example, we show that BSviewer could be specifically helpful for interpreting the data with allele-specific DNA methylation pattern. Availability and implementation BSviewer is implemented in Perl and runs on most GNU/Linux platforms. Source code and testing dataset are freely available at http://sunlab.cpy.cuhk.edu.hk/BSviewer/." @default.
- W2743402317 created "2017-08-17" @default.
- W2743402317 creator A5001836351 @default.
- W2743402317 creator A5079836538 @default.
- W2743402317 creator A5087246967 @default.
- W2743402317 creator A5089826451 @default.
- W2743402317 date "2017-08-08" @default.
- W2743402317 modified "2023-10-14" @default.
- W2743402317 title "BSviewer: a genotype-preserving, nucleotide-level visualizer for bisulfite sequencing data" @default.
- W2743402317 cites W1993202658 @default.
- W2743402317 cites W2037020325 @default.
- W2743402317 cites W2059099579 @default.
- W2743402317 cites W2092911110 @default.
- W2743402317 cites W2117131162 @default.
- W2743402317 cites W2128016314 @default.
- W2743402317 cites W2136768441 @default.
- W2743402317 cites W2279206987 @default.
- W2743402317 cites W2440692448 @default.
- W2743402317 cites W2541006501 @default.
- W2743402317 doi "https://doi.org/10.1093/bioinformatics/btx505" @default.
- W2743402317 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/28961742" @default.
- W2743402317 hasPublicationYear "2017" @default.
- W2743402317 type Work @default.
- W2743402317 sameAs 2743402317 @default.
- W2743402317 citedByCount "5" @default.
- W2743402317 countsByYear W27434023172019 @default.
- W2743402317 countsByYear W27434023172020 @default.
- W2743402317 countsByYear W27434023172023 @default.
- W2743402317 crossrefType "journal-article" @default.
- W2743402317 hasAuthorship W2743402317A5001836351 @default.
- W2743402317 hasAuthorship W2743402317A5079836538 @default.
- W2743402317 hasAuthorship W2743402317A5087246967 @default.
- W2743402317 hasAuthorship W2743402317A5089826451 @default.
- W2743402317 hasBestOaLocation W27434023171 @default.
- W2743402317 hasConcept C104317684 @default.
- W2743402317 hasConcept C124101348 @default.
- W2743402317 hasConcept C135763542 @default.
- W2743402317 hasConcept C136953436 @default.
- W2743402317 hasConcept C140173407 @default.
- W2743402317 hasConcept C150194340 @default.
- W2743402317 hasConcept C153209595 @default.
- W2743402317 hasConcept C189235521 @default.
- W2743402317 hasConcept C190727270 @default.
- W2743402317 hasConcept C199360897 @default.
- W2743402317 hasConcept C2775959680 @default.
- W2743402317 hasConcept C2777002779 @default.
- W2743402317 hasConcept C33288867 @default.
- W2743402317 hasConcept C36464697 @default.
- W2743402317 hasConcept C41008148 @default.
- W2743402317 hasConcept C43126263 @default.
- W2743402317 hasConcept C51679486 @default.
- W2743402317 hasConcept C54355233 @default.
- W2743402317 hasConcept C70721500 @default.
- W2743402317 hasConcept C86803240 @default.
- W2743402317 hasConceptScore W2743402317C104317684 @default.
- W2743402317 hasConceptScore W2743402317C124101348 @default.
- W2743402317 hasConceptScore W2743402317C135763542 @default.
- W2743402317 hasConceptScore W2743402317C136953436 @default.
- W2743402317 hasConceptScore W2743402317C140173407 @default.
- W2743402317 hasConceptScore W2743402317C150194340 @default.
- W2743402317 hasConceptScore W2743402317C153209595 @default.
- W2743402317 hasConceptScore W2743402317C189235521 @default.
- W2743402317 hasConceptScore W2743402317C190727270 @default.
- W2743402317 hasConceptScore W2743402317C199360897 @default.
- W2743402317 hasConceptScore W2743402317C2775959680 @default.
- W2743402317 hasConceptScore W2743402317C2777002779 @default.
- W2743402317 hasConceptScore W2743402317C33288867 @default.
- W2743402317 hasConceptScore W2743402317C36464697 @default.
- W2743402317 hasConceptScore W2743402317C41008148 @default.
- W2743402317 hasConceptScore W2743402317C43126263 @default.
- W2743402317 hasConceptScore W2743402317C51679486 @default.
- W2743402317 hasConceptScore W2743402317C54355233 @default.
- W2743402317 hasConceptScore W2743402317C70721500 @default.
- W2743402317 hasConceptScore W2743402317C86803240 @default.
- W2743402317 hasIssue "21" @default.
- W2743402317 hasLocation W27434023171 @default.
- W2743402317 hasLocation W27434023172 @default.
- W2743402317 hasOpenAccess W2743402317 @default.
- W2743402317 hasPrimaryLocation W27434023171 @default.
- W2743402317 hasRelatedWork W1975609775 @default.
- W2743402317 hasRelatedWork W2033244804 @default.
- W2743402317 hasRelatedWork W2054284274 @default.
- W2743402317 hasRelatedWork W2106446870 @default.
- W2743402317 hasRelatedWork W2382375971 @default.
- W2743402317 hasRelatedWork W2520697529 @default.
- W2743402317 hasRelatedWork W2614855875 @default.
- W2743402317 hasRelatedWork W2911544435 @default.
- W2743402317 hasRelatedWork W3032578724 @default.
- W2743402317 hasRelatedWork W3195306811 @default.
- W2743402317 hasVolume "33" @default.
- W2743402317 isParatext "false" @default.
- W2743402317 isRetracted "false" @default.
- W2743402317 magId "2743402317" @default.
- W2743402317 workType "article" @default.