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• W2775498959 abstract "Various approaches to alignment-free sequence comparison are based on the length of exact or inexact word matches between pairs of input sequences. Haubold et al. (J Comput Biol 16:1487-1500, 2009) showed how the average number of substitutions per position between two DNA sequences can be estimated based on the average length of exact common substrings.In this paper, we study the length distribution of k-mismatch common substrings between two sequences. We show that the number of substitutions per position can be accurately estimated from the position of a local maximum in the length distribution of their k-mismatch common substrings." @default.
• W2775498959 created "2017-12-22" @default.
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• W2775498959 date "2017-12-01" @default.
• W2775498959 modified "2023-10-18" @default.
• W2775498959 title "Phylogeny reconstruction based on the length distribution of k-mismatch common substrings" @default.
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• W2775498959 doi "https://doi.org/10.1186/s13015-017-0118-8" @default.
• W2775498959 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5724348" @default.
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