FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2779582662> ?p ?o ?g. }

• W2779582662 endingPage "1528" @default.
• W2779582662 startingPage "1522" @default.
• W2779582662 abstract "Abstract Motivation Computational methods for the prediction of peptide-MHC binding have become an integral and essential component for candidate selection in experimental T cell epitope discovery studies. The sheer amount of published prediction methods—and often discordant reports on their performance—poses a considerable quandary to the experimentalist who needs to choose the best tool for their research. Results With the goal to provide an unbiased, transparent evaluation of the state-of-the-art in the field, we created an automated platform to benchmark peptide-MHC class II binding prediction tools. The platform evaluates the absolute and relative predictive performance of all participating tools on data newly entered into the Immune Epitope Database (IEDB) before they are made public, thereby providing a frequent, unbiased assessment of available prediction tools. The benchmark runs on a weekly basis, is fully automated, and displays up-to-date results on a publicly accessible website. The initial benchmark described here included six commonly used prediction servers, but other tools are encouraged to join with a simple sign-up procedure. Performance evaluation on 59 data sets composed of over 10 000 binding affinity measurements suggested that NetMHCIIpan is currently the most accurate tool, followed by NN-align and the IEDB consensus method. Availability and implementation Weekly reports on the participating methods can be found online at: http://tools.iedb.org/auto_bench/mhcii/weekly/. Supplementary information Supplementary data are available at Bioinformatics online." @default.
• W2779582662 created "2018-01-05" @default.
• W2779582662 creator A5003717199 @default.
• W2779582662 creator A5023547268 @default.
• W2779582662 creator A5045352516 @default.
• W2779582662 creator A5049996758 @default.
• W2779582662 creator A5063725110 @default.
• W2779582662 creator A5076702280 @default.
• W2779582662 date "2017-12-21" @default.
• W2779582662 modified "2023-10-16" @default.
• W2779582662 title "An automated benchmarking platform for MHC class II binding prediction methods" @default.
• W2779582662 cites W1596377987 @default.
• W2779582662 cites W1981106544 @default.
• W2779582662 cites W1991461541 @default.
• W2779582662 cites W2012523084 @default.
• W2779582662 cites W2050658429 @default.
• W2779582662 cites W2053707749 @default.
• W2779582662 cites W2099500226 @default.
• W2779582662 cites W2100350770 @default.
• W2779582662 cites W2102237050 @default.
• W2779582662 cites W2120399005 @default.
• W2779582662 cites W2122779464 @default.
• W2779582662 cites W2125644345 @default.
• W2779582662 cites W2127284149 @default.
• W2779582662 cites W2129612249 @default.
• W2779582662 cites W2135455279 @default.
• W2779582662 cites W2136066387 @default.
• W2779582662 cites W2148146008 @default.
• W2779582662 cites W2149350146 @default.
• W2779582662 cites W2160303218 @default.
• W2779582662 cites W2187048772 @default.
• W2779582662 cites W2304327826 @default.
• W2779582662 cites W2334668438 @default.
• W2779582662 cites W2607286972 @default.
• W2779582662 cites W614463525 @default.
• W2779582662 doi "https://doi.org/10.1093/bioinformatics/btx820" @default.
• W2779582662 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5925780" @default.
• W2779582662 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/29281002" @default.
• W2779582662 hasPublicationYear "2017" @default.
• W2779582662 type Work @default.
• W2779582662 sameAs 2779582662 @default.
• W2779582662 citedByCount "63" @default.
• W2779582662 countsByYear W27795826622018 @default.
• W2779582662 countsByYear W27795826622019 @default.
• W2779582662 countsByYear W27795826622020 @default.
• W2779582662 countsByYear W27795826622021 @default.
• W2779582662 countsByYear W27795826622022 @default.
• W2779582662 countsByYear W27795826622023 @default.
• W2779582662 crossrefType "journal-article" @default.
• W2779582662 hasAuthorship W2779582662A5003717199 @default.
• W2779582662 hasAuthorship W2779582662A5023547268 @default.
• W2779582662 hasAuthorship W2779582662A5045352516 @default.
• W2779582662 hasAuthorship W2779582662A5049996758 @default.
• W2779582662 hasAuthorship W2779582662A5063725110 @default.
• W2779582662 hasAuthorship W2779582662A5076702280 @default.
• W2779582662 hasBestOaLocation W27795826621 @default.
• W2779582662 hasConcept C119857082 @default.
• W2779582662 hasConcept C124101348 @default.
• W2779582662 hasConcept C13280743 @default.
• W2779582662 hasConcept C144133560 @default.
• W2779582662 hasConcept C154945302 @default.
• W2779582662 hasConcept C162853370 @default.
• W2779582662 hasConcept C185798385 @default.
• W2779582662 hasConcept C205649164 @default.
• W2779582662 hasConcept C2522767166 @default.
• W2779582662 hasConcept C2777212361 @default.
• W2779582662 hasConcept C41008148 @default.
• W2779582662 hasConcept C81917197 @default.
• W2779582662 hasConcept C86251818 @default.
• W2779582662 hasConceptScore W2779582662C119857082 @default.
• W2779582662 hasConceptScore W2779582662C124101348 @default.
• W2779582662 hasConceptScore W2779582662C13280743 @default.
• W2779582662 hasConceptScore W2779582662C144133560 @default.
• W2779582662 hasConceptScore W2779582662C154945302 @default.
• W2779582662 hasConceptScore W2779582662C162853370 @default.
• W2779582662 hasConceptScore W2779582662C185798385 @default.
• W2779582662 hasConceptScore W2779582662C205649164 @default.
• W2779582662 hasConceptScore W2779582662C2522767166 @default.
• W2779582662 hasConceptScore W2779582662C2777212361 @default.
• W2779582662 hasConceptScore W2779582662C41008148 @default.
• W2779582662 hasConceptScore W2779582662C81917197 @default.
• W2779582662 hasConceptScore W2779582662C86251818 @default.
• W2779582662 hasFunder F4320321594 @default.
• W2779582662 hasFunder F4320332161 @default.
• W2779582662 hasIssue "9" @default.
• W2779582662 hasLocation W27795826621 @default.
• W2779582662 hasLocation W27795826622 @default.
• W2779582662 hasLocation W27795826623 @default.
• W2779582662 hasLocation W27795826624 @default.
• W2779582662 hasLocation W27795826625 @default.
• W2779582662 hasOpenAccess W2779582662 @default.
• W2779582662 hasPrimaryLocation W27795826621 @default.
• W2779582662 hasRelatedWork W2593649365 @default.
• W2779582662 hasRelatedWork W2950577464 @default.
• W2779582662 hasRelatedWork W3170111948 @default.
• W2779582662 hasRelatedWork W4221142186 @default.
• W2779582662 hasRelatedWork W4300037694 @default.
• W2779582662 hasRelatedWork W4302612983 @default.

• next