FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2782350151> ?p ?o ?g. }

• W2782350151 abstract "Ontologies are representations of a conceptualization of a domain. Traditionally, ontologies in biology were represented as directed acyclic graphs (DAG) which represent the backbone taxonomy and additional relations between classes. These graphs are widely exploited for data analysis in the form of ontology enrichment or computation of semantic similarity. More recently, ontologies are developed in a formal language such as the Web Ontology Language (OWL) and consist of a set of axioms through which classes are defined or constrained. While the taxonomy of an ontology can be inferred directly from the axioms of an ontology as one of the standard OWL reasoning tasks, creating general graph structures from OWL ontologies that exploit the ontologies’ semantic content remains a challenge. We developed a method to transform ontologies into graphs using an automated reasoner while taking into account all relations between classes. Searching for (existential) patterns in the deductive closure of ontologies, we can identify relations between classes that are implied but not asserted and generate graph structures that encode for a large part of the ontologies’ semantic content. We demonstrate the advantages of our method by applying it to inference of protein-protein interactions through semantic similarity over the Gene Ontology and demonstrate that performance is increased when graph structures are inferred using deductive inference according to our method. Our software and experiment results are available at http://github.com/bio-ontology-research-group/Onto2Graph . Onto2Graph is a method to generate graph structures from OWL ontologies using automated reasoning. The resulting graphs can be used for improved ontology visualization and ontology-based data analysis." @default.
• W2782350151 created "2018-01-12" @default.
• W2782350151 creator A5043808311 @default.
• W2782350151 creator A5045878566 @default.
• W2782350151 date "2018-01-05" @default.
• W2782350151 modified "2023-10-18" @default.
• W2782350151 title "Inferring ontology graph structures using OWL reasoning" @default.
• W2782350151 cites W1601038846 @default.
• W2782350151 cites W1659833910 @default.
• W2782350151 cites W1965138864 @default.
• W2782350151 cites W1974896839 @default.
• W2782350151 cites W1980948656 @default.
• W2782350151 cites W2012361142 @default.
• W2782350151 cites W2012896813 @default.
• W2782350151 cites W2084168100 @default.
• W2782350151 cites W2091139722 @default.
• W2782350151 cites W2099364528 @default.
• W2782350151 cites W2103017472 @default.
• W2782350151 cites W2103260426 @default.
• W2782350151 cites W2106350001 @default.
• W2782350151 cites W2112466127 @default.
• W2782350151 cites W2112872859 @default.
• W2782350151 cites W2120428260 @default.
• W2782350151 cites W2124834853 @default.
• W2782350151 cites W2130410032 @default.
• W2782350151 cites W2131660156 @default.
• W2782350151 cites W2133109597 @default.
• W2782350151 cites W2136961946 @default.
• W2782350151 cites W2139315672 @default.
• W2782350151 cites W2146495783 @default.
• W2782350151 cites W2147834895 @default.
• W2782350151 cites W2157825442 @default.
• W2782350151 cites W2158698691 @default.
• W2782350151 cites W2161358836 @default.
• W2782350151 cites W2163485494 @default.
• W2782350151 cites W2164290176 @default.
• W2782350151 cites W2201927605 @default.
• W2782350151 cites W2562531153 @default.
• W2782350151 cites W3099272318 @default.
• W2782350151 cites W55962619 @default.
• W2782350151 doi "https://doi.org/10.1186/s12859-017-1999-8" @default.
• W2782350151 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5756413" @default.
• W2782350151 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/29304741" @default.
• W2782350151 hasPublicationYear "2018" @default.
• W2782350151 type Work @default.
• W2782350151 sameAs 2782350151 @default.
• W2782350151 citedByCount "22" @default.
• W2782350151 countsByYear W27823501512018 @default.
• W2782350151 countsByYear W27823501512019 @default.
• W2782350151 countsByYear W27823501512020 @default.
• W2782350151 countsByYear W27823501512021 @default.
• W2782350151 countsByYear W27823501512022 @default.
• W2782350151 crossrefType "journal-article" @default.
• W2782350151 hasAuthorship W2782350151A5043808311 @default.
• W2782350151 hasAuthorship W2782350151A5045878566 @default.
• W2782350151 hasBestOaLocation W27823501511 @default.
• W2782350151 hasConcept C101230327 @default.
• W2782350151 hasConcept C111472728 @default.
• W2782350151 hasConcept C130318100 @default.
• W2782350151 hasConcept C137003198 @default.
• W2782350151 hasConcept C137982476 @default.
• W2782350151 hasConcept C138885662 @default.
• W2782350151 hasConcept C154210476 @default.
• W2782350151 hasConcept C154945302 @default.
• W2782350151 hasConcept C204321447 @default.
• W2782350151 hasConcept C2129575 @default.
• W2782350151 hasConcept C22550185 @default.
• W2782350151 hasConcept C23123220 @default.
• W2782350151 hasConcept C25810664 @default.
• W2782350151 hasConcept C41008148 @default.
• W2782350151 hasConcept C78726541 @default.
• W2782350151 hasConcept C9616225 @default.
• W2782350151 hasConcept C98893333 @default.
• W2782350151 hasConceptScore W2782350151C101230327 @default.
• W2782350151 hasConceptScore W2782350151C111472728 @default.
• W2782350151 hasConceptScore W2782350151C130318100 @default.
• W2782350151 hasConceptScore W2782350151C137003198 @default.
• W2782350151 hasConceptScore W2782350151C137982476 @default.
• W2782350151 hasConceptScore W2782350151C138885662 @default.
• W2782350151 hasConceptScore W2782350151C154210476 @default.
• W2782350151 hasConceptScore W2782350151C154945302 @default.
• W2782350151 hasConceptScore W2782350151C204321447 @default.
• W2782350151 hasConceptScore W2782350151C2129575 @default.
• W2782350151 hasConceptScore W2782350151C22550185 @default.
• W2782350151 hasConceptScore W2782350151C23123220 @default.
• W2782350151 hasConceptScore W2782350151C25810664 @default.
• W2782350151 hasConceptScore W2782350151C41008148 @default.
• W2782350151 hasConceptScore W2782350151C78726541 @default.
• W2782350151 hasConceptScore W2782350151C9616225 @default.
• W2782350151 hasConceptScore W2782350151C98893333 @default.
• W2782350151 hasFunder F4320322320 @default.
• W2782350151 hasIssue "1" @default.
• W2782350151 hasLocation W27823501511 @default.
• W2782350151 hasLocation W27823501512 @default.
• W2782350151 hasLocation W27823501513 @default.
• W2782350151 hasLocation W27823501514 @default.
• W2782350151 hasLocation W27823501515 @default.
• W2782350151 hasLocation W27823501516 @default.
• W2782350151 hasOpenAccess W2782350151 @default.
• W2782350151 hasPrimaryLocation W27823501511 @default.

• next