Matches in SemOpenAlex for { <https://semopenalex.org/work/W2787754672> ?p ?o ?g. }
Showing items 1 to 63 of
63
with 100 items per page.
- W2787754672 abstract "Evolutionary biology has entered an era of unprecedented amounts of DNA sequence data, as new sequencing platforms such as Massive Parallel Sequencing (MPS) can generate billions of nucleotides within less than a day. The current bottleneck is how to efficiently handle, process, and analyze such large amounts of data in an automated and reproducible way. To tackle these challenges we introduce the Sequence Capture Processor (SECAPR) pipeline for processing raw sequencing data into multiple sequence alignments for downstream phylogenetic and phylogeographic analyses. SECAPR is user-friendly and we provide an exhaustive tutorial intended for users with no prior experience with analyzing MPS output. SECAPR is particularly useful for the processing of sequence capture (= hybrid enrichment) datasets for non-model organisms, as we demonstrate using an empirical dataset of the palm genus Geonoma (Arecaceae). Various quality control and plotting functions help the user to decide on the most suitable settings for even challenging datasets. SECAPR is an easy-to-use, free, and versatile pipeline, aimed to enable efficient and reproducible processing of MPS data for many samples in parallel." @default.
- W2787754672 created "2018-02-23" @default.
- W2787754672 creator A5039087694 @default.
- W2787754672 creator A5049324341 @default.
- W2787754672 creator A5050118092 @default.
- W2787754672 creator A5078825751 @default.
- W2787754672 creator A5086045933 @default.
- W2787754672 date "2018-02-01" @default.
- W2787754672 modified "2023-09-23" @default.
- W2787754672 title "SECAPR - A bioinformatics pipeline for the rapid and user-friendly alignment of hybrid enrichment sequences, from raw reads to alignments" @default.
- W2787754672 doi "https://doi.org/10.7287/peerj.preprints.26477v1" @default.
- W2787754672 hasPublicationYear "2018" @default.
- W2787754672 type Work @default.
- W2787754672 sameAs 2787754672 @default.
- W2787754672 citedByCount "0" @default.
- W2787754672 crossrefType "posted-content" @default.
- W2787754672 hasAuthorship W2787754672A5039087694 @default.
- W2787754672 hasAuthorship W2787754672A5049324341 @default.
- W2787754672 hasAuthorship W2787754672A5050118092 @default.
- W2787754672 hasAuthorship W2787754672A5078825751 @default.
- W2787754672 hasAuthorship W2787754672A5086045933 @default.
- W2787754672 hasBestOaLocation W27877546721 @default.
- W2787754672 hasConcept C111919701 @default.
- W2787754672 hasConcept C41008148 @default.
- W2787754672 hasConcept C43521106 @default.
- W2787754672 hasConcept C60644358 @default.
- W2787754672 hasConcept C61437842 @default.
- W2787754672 hasConcept C70721500 @default.
- W2787754672 hasConcept C86803240 @default.
- W2787754672 hasConceptScore W2787754672C111919701 @default.
- W2787754672 hasConceptScore W2787754672C41008148 @default.
- W2787754672 hasConceptScore W2787754672C43521106 @default.
- W2787754672 hasConceptScore W2787754672C60644358 @default.
- W2787754672 hasConceptScore W2787754672C61437842 @default.
- W2787754672 hasConceptScore W2787754672C70721500 @default.
- W2787754672 hasConceptScore W2787754672C86803240 @default.
- W2787754672 hasLocation W27877546721 @default.
- W2787754672 hasOpenAccess W2787754672 @default.
- W2787754672 hasPrimaryLocation W27877546721 @default.
- W2787754672 hasRelatedWork W1966822396 @default.
- W2787754672 hasRelatedWork W1978037674 @default.
- W2787754672 hasRelatedWork W1997752311 @default.
- W2787754672 hasRelatedWork W2103837125 @default.
- W2787754672 hasRelatedWork W2107164256 @default.
- W2787754672 hasRelatedWork W2127651281 @default.
- W2787754672 hasRelatedWork W2291614554 @default.
- W2787754672 hasRelatedWork W2292928167 @default.
- W2787754672 hasRelatedWork W2331798177 @default.
- W2787754672 hasRelatedWork W2416461679 @default.
- W2787754672 hasRelatedWork W2462976181 @default.
- W2787754672 hasRelatedWork W2788666697 @default.
- W2787754672 hasRelatedWork W2890111189 @default.
- W2787754672 hasRelatedWork W2903193789 @default.
- W2787754672 hasRelatedWork W2980489668 @default.
- W2787754672 hasRelatedWork W3084263815 @default.
- W2787754672 hasRelatedWork W3129974521 @default.
- W2787754672 hasRelatedWork W3133170961 @default.
- W2787754672 hasRelatedWork W3203546335 @default.
- W2787754672 hasRelatedWork W3180664778 @default.
- W2787754672 isParatext "false" @default.
- W2787754672 isRetracted "false" @default.
- W2787754672 magId "2787754672" @default.
- W2787754672 workType "article" @default.