Matches in SemOpenAlex for { <https://semopenalex.org/work/W2795156736> ?p ?o ?g. }
- W2795156736 abstract "Formation of nucleosomes along eukaryotic DNA has an impact on transcription. Major transcriptional changes occur in response to low external phosphate (Pi) in plants, but the involvement of chromatin-level mechanisms in Pi starvation responses have not been investigated. We mapped nucleosomes along with transcriptional changes after 24-h of Pi starvation in rice (Oryza sativa) by deep sequencing of micrococcal nuclease digested chromatin and ribosome-depleted RNA. We demonstrated that nucleosome patterns at rice genes were affected by both cis- and trans-determinants, including GC content and transcription. Also, categorizing rice genes by nucleosome patterns across the transcription start site (TSS) revealed nucleosome patterns that correlated with distinct functional categories of genes. We further demonstrated that Pi starvation resulted in numerous dynamic nucleosomes, which were enhanced at genes differentially expressed in response to Pi starvation. We demonstrate that rice nucleosome patterns are suggestive of gene functions, and reveal a link between chromatin remodeling and transcriptional changes in response to deficiency of a major macronutrient. Our findings help to enhance the understanding towards eukaryotic gene regulation at the chromatin level." @default.
- W2795156736 created "2018-04-06" @default.
- W2795156736 creator A5005493325 @default.
- W2795156736 creator A5007098890 @default.
- W2795156736 creator A5022462100 @default.
- W2795156736 creator A5034555201 @default.
- W2795156736 creator A5038647089 @default.
- W2795156736 creator A5067086045 @default.
- W2795156736 creator A5068028883 @default.
- W2795156736 date "2018-01-26" @default.
- W2795156736 modified "2023-10-15" @default.
- W2795156736 title "Rice nucleosome patterns undergo remodeling coincident with stress-induced gene expression" @default.
- W2795156736 cites W1482867610 @default.
- W2795156736 cites W1527862189 @default.
- W2795156736 cites W1637308698 @default.
- W2795156736 cites W1876193775 @default.
- W2795156736 cites W1912410317 @default.
- W2795156736 cites W1965979287 @default.
- W2795156736 cites W1966361889 @default.
- W2795156736 cites W1969503475 @default.
- W2795156736 cites W1992512552 @default.
- W2795156736 cites W1997519837 @default.
- W2795156736 cites W2002197756 @default.
- W2795156736 cites W2003447887 @default.
- W2795156736 cites W2004833582 @default.
- W2795156736 cites W2007350361 @default.
- W2795156736 cites W2014089799 @default.
- W2795156736 cites W2014119967 @default.
- W2795156736 cites W2016597274 @default.
- W2795156736 cites W2016786878 @default.
- W2795156736 cites W2018604728 @default.
- W2795156736 cites W2021341670 @default.
- W2795156736 cites W2036618361 @default.
- W2795156736 cites W2040909468 @default.
- W2795156736 cites W2042198281 @default.
- W2795156736 cites W2055802125 @default.
- W2795156736 cites W2069545688 @default.
- W2795156736 cites W2070771145 @default.
- W2795156736 cites W2077562677 @default.
- W2795156736 cites W2080334210 @default.
- W2795156736 cites W2080569293 @default.
- W2795156736 cites W2084547968 @default.
- W2795156736 cites W2086236731 @default.
- W2795156736 cites W2094929326 @default.
- W2795156736 cites W2095881412 @default.
- W2795156736 cites W2100305481 @default.
- W2795156736 cites W2102619694 @default.
- W2795156736 cites W2105756152 @default.
- W2795156736 cites W2106448802 @default.
- W2795156736 cites W2108432720 @default.
- W2795156736 cites W2113879951 @default.
- W2795156736 cites W2115219137 @default.
- W2795156736 cites W2117624688 @default.
- W2795156736 cites W2118608526 @default.
- W2795156736 cites W2124985265 @default.
- W2795156736 cites W2128595429 @default.
- W2795156736 cites W2134112768 @default.
- W2795156736 cites W2135403680 @default.
- W2795156736 cites W2136144150 @default.
- W2795156736 cites W2138098955 @default.
- W2795156736 cites W2138954322 @default.
- W2795156736 cites W2140729960 @default.
- W2795156736 cites W2144792857 @default.
- W2795156736 cites W2145186768 @default.
- W2795156736 cites W2153548636 @default.
- W2795156736 cites W2158752909 @default.
- W2795156736 cites W2159667264 @default.
- W2795156736 cites W2161148315 @default.
- W2795156736 cites W2239118478 @default.
- W2795156736 cites W2341539131 @default.
- W2795156736 cites W2423274958 @default.
- W2795156736 cites W2489117952 @default.
- W2795156736 cites W2517348684 @default.
- W2795156736 cites W2528563747 @default.
- W2795156736 cites W2560760559 @default.
- W2795156736 cites W2972364312 @default.
- W2795156736 cites W4251086924 @default.
- W2795156736 doi "https://doi.org/10.1186/s12864-017-4397-8" @default.
- W2795156736 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5787291" @default.
- W2795156736 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/29373953" @default.
- W2795156736 hasPublicationYear "2018" @default.
- W2795156736 type Work @default.
- W2795156736 sameAs 2795156736 @default.
- W2795156736 citedByCount "12" @default.
- W2795156736 countsByYear W27951567362018 @default.
- W2795156736 countsByYear W27951567362019 @default.
- W2795156736 countsByYear W27951567362020 @default.
- W2795156736 countsByYear W27951567362021 @default.
- W2795156736 countsByYear W27951567362022 @default.
- W2795156736 crossrefType "journal-article" @default.
- W2795156736 hasAuthorship W2795156736A5005493325 @default.
- W2795156736 hasAuthorship W2795156736A5007098890 @default.
- W2795156736 hasAuthorship W2795156736A5022462100 @default.
- W2795156736 hasAuthorship W2795156736A5034555201 @default.
- W2795156736 hasAuthorship W2795156736A5038647089 @default.
- W2795156736 hasAuthorship W2795156736A5067086045 @default.
- W2795156736 hasAuthorship W2795156736A5068028883 @default.
- W2795156736 hasBestOaLocation W27951567361 @default.
- W2795156736 hasConcept C104317684 @default.
- W2795156736 hasConcept C138885662 @default.