Matches in SemOpenAlex for { <https://semopenalex.org/work/W2800282398> ?p ?o ?g. }
- W2800282398 endingPage "5851" @default.
- W2800282398 startingPage "5837" @default.
- W2800282398 abstract "DNA barcoding has proved difficult in a number of woody plant genera, including the ecologically important oak genus Quercus. In this study, we utilized restrictionsite-associated DNA sequencing (RAD-seq) to develop an economical single nucleotide polymorphism (SNP) DNA barcoding system that suffices to distinguish eight common, sympatric eastern North American white oak species. Two de novo clustering pipelines, PyRAD and Stacks, were used in combination with postclustering bioinformatic tools to generate a list of 291 potential SNPs, 80 of which were included in a barcoding toolkit that is easily implemented using MassARRAY mass spectrometry technology. As a proof-of-concept, we used the genotyping toolkit to infer potential hybridization between North American white oaks transplanted outside of their native range (Q. michauxii, Q. montana, Q muehlenbergii/Q. prinoides, and Q. stellata) into a horticultural collection surrounded by natural forests of locally native trees (Q. alba and Q. macrocarpa) in the living collection at The Morton Arboretum (Lisle, IL, USA). Phylogenetic and clustering analyses suggested low rates of hybridization between cultivated and native species, with the exception of one Q. michauxii mother tree, the acorns of which exhibited high admixture from either Q. alba or Q. stellata and Q. macrocarpa, and a hybrid between Q. stellata that appears to have backcrossed almost exclusively to Q. alba. Together, RAD-seq and MassARRAY technologies allow for efficient development and implementation of a multispecies barcode for one of the more challenging forest tree genera." @default.
- W2800282398 created "2018-05-17" @default.
- W2800282398 creator A5001682989 @default.
- W2800282398 creator A5019051090 @default.
- W2800282398 creator A5041942453 @default.
- W2800282398 creator A5062740807 @default.
- W2800282398 creator A5069127041 @default.
- W2800282398 creator A5075391897 @default.
- W2800282398 date "2018-05-08" @default.
- W2800282398 modified "2023-10-06" @default.
- W2800282398 title "A nuclear DNA barcode for eastern North American oaks and application to a study of hybridization in an Arboretum setting" @default.
- W2800282398 cites W1501478820 @default.
- W2800282398 cites W1510539254 @default.
- W2800282398 cites W1557496323 @default.
- W2800282398 cites W1619623942 @default.
- W2800282398 cites W1895144437 @default.
- W2800282398 cites W1902476369 @default.
- W2800282398 cites W1924369710 @default.
- W2800282398 cites W1925060465 @default.
- W2800282398 cites W1939860824 @default.
- W2800282398 cites W1965692132 @default.
- W2800282398 cites W1969676692 @default.
- W2800282398 cites W1970987566 @default.
- W2800282398 cites W1986403993 @default.
- W2800282398 cites W1989374817 @default.
- W2800282398 cites W1994719551 @default.
- W2800282398 cites W2000625100 @default.
- W2800282398 cites W2004798786 @default.
- W2800282398 cites W2013955994 @default.
- W2800282398 cites W2014136759 @default.
- W2800282398 cites W2019455108 @default.
- W2800282398 cites W2020389323 @default.
- W2800282398 cites W2023126517 @default.
- W2800282398 cites W2028000225 @default.
- W2800282398 cites W2028445701 @default.
- W2800282398 cites W2033109396 @default.
- W2800282398 cites W2038003976 @default.
- W2800282398 cites W2038057813 @default.
- W2800282398 cites W2039930928 @default.
- W2800282398 cites W2043024784 @default.
- W2800282398 cites W2044921269 @default.
- W2800282398 cites W2048587645 @default.
- W2800282398 cites W2055043387 @default.
- W2800282398 cites W2055642906 @default.
- W2800282398 cites W2064748187 @default.
- W2800282398 cites W2066623788 @default.
- W2800282398 cites W2067121015 @default.
- W2800282398 cites W2092712028 @default.
- W2800282398 cites W2098126593 @default.
- W2800282398 cites W2101019506 @default.
- W2800282398 cites W2102049517 @default.
- W2800282398 cites W2102596322 @default.
- W2800282398 cites W2106572204 @default.
- W2800282398 cites W2108524369 @default.
- W2800282398 cites W2108675949 @default.
- W2800282398 cites W2111211467 @default.
- W2800282398 cites W2111589020 @default.
- W2800282398 cites W2112095116 @default.
- W2800282398 cites W2116250987 @default.
- W2800282398 cites W2121512231 @default.
- W2800282398 cites W2121625104 @default.
- W2800282398 cites W2124351063 @default.
- W2800282398 cites W2124607948 @default.
- W2800282398 cites W2127847431 @default.
- W2800282398 cites W2128424319 @default.
- W2800282398 cites W2128880918 @default.
- W2800282398 cites W2138991278 @default.
- W2800282398 cites W2139620129 @default.
- W2800282398 cites W2141244012 @default.
- W2800282398 cites W2143860854 @default.
- W2800282398 cites W2149551777 @default.
- W2800282398 cites W2151670460 @default.
- W2800282398 cites W2155645861 @default.
- W2800282398 cites W2160276176 @default.
- W2800282398 cites W2160462539 @default.
- W2800282398 cites W2161339576 @default.
- W2800282398 cites W2161901637 @default.
- W2800282398 cites W2166628994 @default.
- W2800282398 cites W2169226239 @default.
- W2800282398 cites W2169773990 @default.
- W2800282398 cites W2170676344 @default.
- W2800282398 cites W2170893305 @default.
- W2800282398 cites W2171224123 @default.
- W2800282398 cites W2175235424 @default.
- W2800282398 cites W2177708330 @default.
- W2800282398 cites W2218095899 @default.
- W2800282398 cites W2274990797 @default.
- W2800282398 cites W2317178693 @default.
- W2800282398 cites W2317243478 @default.
- W2800282398 cites W2332782994 @default.
- W2800282398 cites W2336330109 @default.
- W2800282398 cites W2413905319 @default.
- W2800282398 cites W2415502387 @default.
- W2800282398 cites W2492585770 @default.
- W2800282398 cites W2528462550 @default.
- W2800282398 cites W2597711052 @default.
- W2800282398 cites W2599691945 @default.
- W2800282398 cites W2609234600 @default.