FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2806449887> ?p ?o ?g. }

• W2806449887 abstract "Abstract Phosphorylation is the most important type of protein post-translational modification. Accordingly, reliable identification of kinase-mediated phosphorylation has important implications for functional annotation of phosphorylated substrates and characterization of cellular signalling pathways. The local sequence context surrounding potential phosphorylation sites is considered to harbour the most relevant information for phosphorylation site prediction models. However, currently there is a lack of condensed vector representation for this important contextual information, despite the presence of varying residue-level features that can be constructed from sequence homology profiles, structural information, and physicochemical properties. To address this issue, we present PhosContext2vec which is a distributed representation of residue-level sequence contexts for potential phosphorylation sites and demonstrate its application in both general and kinase-specific phosphorylation site predictions. Benchmarking experiments indicate that PhosContext2vec could achieve promising predictive performance compared with several other existing methods for phosphorylation site prediction. We envisage that PhosContext2vec, as a new sequence context representation, can be used in combination with other informative residue-level features to improve the classification performance in a number of related bioinformatics tasks that require appropriate residue-level feature vector representation and extraction. The web server of PhosContext2vec is publicly available at http://phoscontext2vec.erc.monash.edu/." @default.
• W2806449887 created "2018-06-13" @default.
• W2806449887 creator A5012709797 @default.
• W2806449887 creator A5026134203 @default.
• W2806449887 creator A5048815917 @default.
• W2806449887 creator A5050620343 @default.
• W2806449887 date "2018-05-29" @default.
• W2806449887 modified "2023-10-13" @default.
• W2806449887 title "PhosContext2vec: a distributed representation of residue-level sequence contexts and its application to general and kinase-specific phosphorylation site prediction" @default.
• W2806449887 cites W116068320 @default.
• W2806449887 cites W1501531009 @default.
• W2806449887 cites W1596947964 @default.
• W2806449887 cites W1817561967 @default.
• W2806449887 cites W1966194538 @default.
• W2806449887 cites W1968129408 @default.
• W2806449887 cites W1987407788 @default.
• W2806449887 cites W1995989434 @default.
• W2806449887 cites W1996446367 @default.
• W2806449887 cites W2000299206 @default.
• W2806449887 cites W2001349696 @default.
• W2806449887 cites W2004377868 @default.
• W2806449887 cites W2005120335 @default.
• W2806449887 cites W2011953977 @default.
• W2806449887 cites W2019853549 @default.
• W2806449887 cites W2030990710 @default.
• W2806449887 cites W2038163496 @default.
• W2806449887 cites W2043794217 @default.
• W2806449887 cites W2061119986 @default.
• W2806449887 cites W2064675550 @default.
• W2806449887 cites W2069217708 @default.
• W2806449887 cites W2073179024 @default.
• W2806449887 cites W2098715150 @default.
• W2806449887 cites W2099686283 @default.
• W2806449887 cites W2102025585 @default.
• W2806449887 cites W2103404876 @default.
• W2806449887 cites W2103525038 @default.
• W2806449887 cites W2104244040 @default.
• W2806449887 cites W2109021234 @default.
• W2806449887 cites W2119423166 @default.
• W2806449887 cites W2122664708 @default.
• W2806449887 cites W2122863289 @default.
• W2806449887 cites W2127648442 @default.
• W2806449887 cites W2130277691 @default.
• W2806449887 cites W2134129243 @default.
• W2806449887 cites W2137852592 @default.
• W2806449887 cites W2140638448 @default.
• W2806449887 cites W2146913682 @default.
• W2806449887 cites W2152365098 @default.
• W2806449887 cites W2158714788 @default.
• W2806449887 cites W2162172965 @default.
• W2806449887 cites W2162574056 @default.
• W2806449887 cites W2162980545 @default.
• W2806449887 cites W2163485494 @default.
• W2806449887 cites W2168012258 @default.
• W2806449887 cites W2465012682 @default.
• W2806449887 cites W2472014052 @default.
• W2806449887 cites W2507606055 @default.
• W2806449887 cites W2536062280 @default.
• W2806449887 cites W2567587907 @default.
• W2806449887 cites W2737403359 @default.
• W2806449887 cites W2739999456 @default.
• W2806449887 cites W2742750032 @default.
• W2806449887 cites W2766389776 @default.
• W2806449887 doi "https://doi.org/10.1038/s41598-018-26392-7" @default.
• W2806449887 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/5974293" @default.
• W2806449887 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/29844483" @default.
• W2806449887 hasPublicationYear "2018" @default.
• W2806449887 type Work @default.
• W2806449887 sameAs 2806449887 @default.
• W2806449887 citedByCount "24" @default.
• W2806449887 countsByYear W28064498872018 @default.
• W2806449887 countsByYear W28064498872019 @default.
• W2806449887 countsByYear W28064498872020 @default.
• W2806449887 countsByYear W28064498872021 @default.
• W2806449887 countsByYear W28064498872022 @default.
• W2806449887 countsByYear W28064498872023 @default.
• W2806449887 crossrefType "journal-article" @default.
• W2806449887 hasAuthorship W2806449887A5012709797 @default.
• W2806449887 hasAuthorship W2806449887A5026134203 @default.
• W2806449887 hasAuthorship W2806449887A5048815917 @default.
• W2806449887 hasAuthorship W2806449887A5050620343 @default.
• W2806449887 hasBestOaLocation W28064498871 @default.
• W2806449887 hasConcept C100631289 @default.
• W2806449887 hasConcept C11960822 @default.
• W2806449887 hasConcept C124101348 @default.
• W2806449887 hasConcept C151730666 @default.
• W2806449887 hasConcept C154945302 @default.
• W2806449887 hasConcept C17744445 @default.
• W2806449887 hasConcept C181199279 @default.
• W2806449887 hasConcept C184235292 @default.
• W2806449887 hasConcept C199539241 @default.
• W2806449887 hasConcept C2776359362 @default.
• W2806449887 hasConcept C2778112365 @default.
• W2806449887 hasConcept C2779343474 @default.
• W2806449887 hasConcept C41008148 @default.
• W2806449887 hasConcept C55493867 @default.
• W2806449887 hasConcept C60644358 @default.
• W2806449887 hasConcept C70721500 @default.
• W2806449887 hasConcept C86803240 @default.
• W2806449887 hasConcept C87325107 @default.

• next