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• W2806574039 abstract "ATHLATES (accurate typing of human leukocyte antigen through exome sequencing) was originally developed to analyze whole-exome sequencing (exome-seq) data from the Illumina platform and to predict the HLA genotype at 2-field or higher resolution. HLA locus-specific reads are first collected by stringent read mapping to the IMGT/HLA database. ATHLATES then performs read assembly, candidate allele identification, and genotype inference. Here, we describe the protocol of using ATHLATES for the above purpose and expand the application to analyze targeted sequencing data using amplicons of full HLA genes." @default.
• W2806574039 created "2018-06-13" @default.
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• W2806574039 date "2018-01-01" @default.
• W2806574039 modified "2023-09-28" @default.
• W2806574039 title "Using Exome and Amplicon-Based Sequencing Data for High-Resolution HLA Typing with ATHLATES" @default.
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• W2806574039 doi "https://doi.org/10.1007/978-1-4939-8546-3_14" @default.
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