FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2854633701> ?p ?o ?g. }

• W2854633701 endingPage "186" @default.
• W2854633701 startingPage "179" @default.
• W2854633701 abstract "The structures of plant mitochondrial genomes are more complex than those of animals. One of the reasons for this is that plant mitochondrial genomes typically have many long and short repeated sequences and intra- and intermolecular recombination may create various DNA molecules in this organelle. Recombination may sometimes create a novel gene that causes cytoplasmic male sterility (CMS). The onion has several cytoplasm types, with some causing CMS while others do not. The complete mitochondrial genome sequence of the onion was reported for an inbred line with CMS-S cytoplasm; however, the number of differences between onion strains remains unclear, and studies on purified mitochondrial DNA (mtDNA) have not yet been performed. Furthermore, analyses of transcripts in the mitochondrial genome have not been conducted. In the present study, we examined the mitochondrial genome of the onion variety “Momiji-3” (Allium cepa L.) possessing CMS-S-type cytoplasm using next-generation sequencing (NGS). The “Momiji-3” mitochondrial genome mainly exists as three circles as a result of recombination through repeated sequences and we herein succeeded for the first time in visualizing its structure using pulsed field gel electrophoresis (PFGE). The ability to clarify the structure of the mitochondrial genome is rare in plant mitochondria; therefore, “Momiji-3” represents a good example for elucidating complex plant mitochondrial genomes. We also mapped transcript data to the mitochondrial genome in order to identify the RNA-editing positions in all gene-coding regions and estimate the expression levels of genes. We identified 635 editing positions in gene-coding regions. Start and stop codons were created by RNA editing in six genes (nad1, nad4L, atp6, atp9, ccmFC, and orf725). The transcript amounts of novel open reading frames (ORFs) were all markedly lower than those of functional genes. These results suggest that a new functional gene was not present in the mitochondrial genome of “Momiji-3”, and that the candidate gene for CMS is orf725, as previously reported." @default.
• W2854633701 created "2018-07-19" @default.
• W2854633701 creator A5036715802 @default.
• W2854633701 creator A5042640325 @default.
• W2854633701 creator A5046133120 @default.
• W2854633701 creator A5048888525 @default.
• W2854633701 creator A5056380487 @default.
• W2854633701 creator A5077907333 @default.
• W2854633701 creator A5080345671 @default.
• W2854633701 date "2019-05-01" @default.
• W2854633701 modified "2023-10-14" @default.
• W2854633701 title "Multichromosomal structure of the onion mitochondrial genome and a transcript analysis" @default.
• W2854633701 cites W1973205003 @default.
• W2854633701 cites W1979189440 @default.
• W2854633701 cites W1998344211 @default.
• W2854633701 cites W2018082146 @default.
• W2854633701 cites W2029702158 @default.
• W2854633701 cites W2033713984 @default.
• W2854633701 cites W2034285706 @default.
• W2854633701 cites W2068618472 @default.
• W2854633701 cites W2084074554 @default.
• W2854633701 cites W2090067607 @default.
• W2854633701 cites W2097659302 @default.
• W2854633701 cites W2097958700 @default.
• W2854633701 cites W2100405084 @default.
• W2854633701 cites W2108978779 @default.
• W2854633701 cites W2126182054 @default.
• W2854633701 cites W2133662754 @default.
• W2854633701 cites W2140002278 @default.
• W2854633701 cites W2147010549 @default.
• W2854633701 cites W2157843019 @default.
• W2854633701 cites W2264683071 @default.
• W2854633701 cites W2310898047 @default.
• W2854633701 cites W2394565790 @default.
• W2854633701 cites W2474143456 @default.
• W2854633701 cites W2501485799 @default.
• W2854633701 cites W2512405010 @default.
• W2854633701 cites W2527567939 @default.
• W2854633701 cites W2554096736 @default.
• W2854633701 doi "https://doi.org/10.1016/j.mito.2018.05.001" @default.
• W2854633701 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30006008" @default.
• W2854633701 hasPublicationYear "2019" @default.
• W2854633701 type Work @default.
• W2854633701 sameAs 2854633701 @default.
• W2854633701 citedByCount "23" @default.
• W2854633701 countsByYear W28546337012018 @default.
• W2854633701 countsByYear W28546337012019 @default.
• W2854633701 countsByYear W28546337012020 @default.
• W2854633701 countsByYear W28546337012021 @default.
• W2854633701 countsByYear W28546337012022 @default.
• W2854633701 countsByYear W28546337012023 @default.
• W2854633701 crossrefType "journal-article" @default.
• W2854633701 hasAuthorship W2854633701A5036715802 @default.
• W2854633701 hasAuthorship W2854633701A5042640325 @default.
• W2854633701 hasAuthorship W2854633701A5046133120 @default.
• W2854633701 hasAuthorship W2854633701A5048888525 @default.
• W2854633701 hasAuthorship W2854633701A5056380487 @default.
• W2854633701 hasAuthorship W2854633701A5077907333 @default.
• W2854633701 hasAuthorship W2854633701A5080345671 @default.
• W2854633701 hasBestOaLocation W28546337011 @default.
• W2854633701 hasConcept C104317684 @default.
• W2854633701 hasConcept C141231307 @default.
• W2854633701 hasConcept C24586158 @default.
• W2854633701 hasConcept C2776473034 @default.
• W2854633701 hasConcept C28859421 @default.
• W2854633701 hasConcept C51679486 @default.
• W2854633701 hasConcept C54355233 @default.
• W2854633701 hasConcept C86803240 @default.
• W2854633701 hasConceptScore W2854633701C104317684 @default.
• W2854633701 hasConceptScore W2854633701C141231307 @default.
• W2854633701 hasConceptScore W2854633701C24586158 @default.
• W2854633701 hasConceptScore W2854633701C2776473034 @default.
• W2854633701 hasConceptScore W2854633701C28859421 @default.
• W2854633701 hasConceptScore W2854633701C51679486 @default.
• W2854633701 hasConceptScore W2854633701C54355233 @default.
• W2854633701 hasConceptScore W2854633701C86803240 @default.
• W2854633701 hasLocation W28546337011 @default.
• W2854633701 hasLocation W28546337012 @default.
• W2854633701 hasOpenAccess W2854633701 @default.
• W2854633701 hasPrimaryLocation W28546337011 @default.
• W2854633701 hasRelatedWork W2022430805 @default.
• W2854633701 hasRelatedWork W2043400581 @default.
• W2854633701 hasRelatedWork W2068493848 @default.
• W2854633701 hasRelatedWork W2077043195 @default.
• W2854633701 hasRelatedWork W2090437422 @default.
• W2854633701 hasRelatedWork W2102467534 @default.
• W2854633701 hasRelatedWork W2157133565 @default.
• W2854633701 hasRelatedWork W2269657756 @default.
• W2854633701 hasRelatedWork W2567787466 @default.
• W2854633701 hasRelatedWork W4308441232 @default.
• W2854633701 hasVolume "46" @default.
• W2854633701 isParatext "false" @default.
• W2854633701 isRetracted "false" @default.
• W2854633701 magId "2854633701" @default.
• W2854633701 workType "article" @default.