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• W2891857602 abstract "The application of whole-genome resequencing based on next-generation sequencing technologies provides an unprecedented opportunity for researchers to resolve long-standing evolutionary problems. Taxa belonging to the grape genus (Vitis L.) represent important genetic resources for the improvement of cultivated grapes. However, it has been challenging to resolve the deep phylogenetic relationships within Vitis, limiting the current understanding of the evolutionary history of Vitis and preventing the use of valuable wild grape resources. In this study, we obtained whole-genome sequence data from 41 accessions representing most taxa within subgenus Vitis and aligned these sequences to the Vitis vinifera L. reference genome. We reconstructed deep phylogenetic relationships within subgenus Vitis based on 2068 single-copy orthologous genes, which led to a robust topology with bootstrap support values of 100% for almost all branches. Three main clades are recovered within subgenus Vitis reflecting their continental distribution through North America, Europe, and East Asia, respectively. Our results suggest that the most possible migration route of the East Asian Vitis is from northeastern Asia southward to South Asia and Southeast Asia. The East Asian Vitis seems to have experienced adaptive radiation during the Miocene. This study provides novel insights into the diversification history of the grape genus Vitis." @default.
• W2891857602 created "2018-09-27" @default.
• W2891857602 creator A5008438892 @default.
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• W2891857602 date "2018-12-01" @default.
• W2891857602 modified "2023-09-29" @default.
• W2891857602 title "Phylogenomics, biogeography, and adaptive radiation of grapes" @default.
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• W2891857602 doi "https://doi.org/10.1016/j.ympev.2018.08.021" @default.
• W2891857602 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30195477" @default.
• W2891857602 hasPublicationYear "2018" @default.
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