Matches in SemOpenAlex for { <https://semopenalex.org/work/W2892444866> ?p ?o ?g. }
- W2892444866 abstract "The cow rumen harbors a great variety of diverse microbes, which form a complex, organized community. Understanding the behavior of this multifarious network is crucial in improving ruminant nutrient use efficiency. The aim of this study was to expand our knowledge by examining 10 Holstein dairy cow rumen fluid fraction whole metagenome and transcriptome datasets. DNA and mRNA sequence data, generated by Ion Torrent, was subjected to quality control and filtering before analysis for core elements. The taxonomic core microbiome consisted of 48 genera belonging to Bacteria (47) and Archaea (1). The genus Prevotella predominated the planktonic core community. Core functional groups were identified using co-occurrence analysis and resulted in 587 genes, from which 62 could be assigned to metabolic functions. Although this was a minimal functional core, it revealed key enzymes participating in various metabolic processes. A diverse and rich collection of enzymes involved in carbohydrate metabolism and other functions were identified. Transcripts coding for enzymes active in methanogenesis made up 1% of the core functions. The genera associated with the core enzyme functions were also identified. Linking genera to functions showed that the main metabolic pathways are primarily provided by Bacteria and several genera may serve as a back-up team for the central functions. The key actors in most essential metabolic routes belong to the genus Prevotella. Confirming earlier studies, the genus Methanobrevibacter carries out the overwhelming majority of rumen methanogenesis and therefore methane emission mitigation seems conceivable via targeting the hydrogenotrophic methanogenesis." @default.
- W2892444866 created "2018-10-05" @default.
- W2892444866 creator A5011318758 @default.
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- W2892444866 date "2018-09-24" @default.
- W2892444866 modified "2023-10-17" @default.
- W2892444866 title "The Planktonic Core Microbiome and Core Functions in the Cattle Rumen by Next Generation Sequencing" @default.
- W2892444866 cites W1162996335 @default.
- W2892444866 cites W1491904717 @default.
- W2892444866 cites W1496933752 @default.
- W2892444866 cites W1510594184 @default.
- W2892444866 cites W1516860651 @default.
- W2892444866 cites W1519781644 @default.
- W2892444866 cites W1543284612 @default.
- W2892444866 cites W1556124044 @default.
- W2892444866 cites W1576335861 @default.
- W2892444866 cites W1838019848 @default.
- W2892444866 cites W1842963151 @default.
- W2892444866 cites W1844010372 @default.
- W2892444866 cites W1878372232 @default.
- W2892444866 cites W1963723331 @default.
- W2892444866 cites W1964206258 @default.
- W2892444866 cites W1965144373 @default.
- W2892444866 cites W1969317163 @default.
- W2892444866 cites W1969346416 @default.
- W2892444866 cites W1972450998 @default.
- W2892444866 cites W1979378990 @default.
- W2892444866 cites W1980486269 @default.
- W2892444866 cites W1980953575 @default.
- W2892444866 cites W1982202953 @default.
- W2892444866 cites W1986413163 @default.
- W2892444866 cites W1987085997 @default.
- W2892444866 cites W1987261729 @default.
- W2892444866 cites W1987760510 @default.
- W2892444866 cites W1988790695 @default.
- W2892444866 cites W1988980712 @default.
- W2892444866 cites W1989348205 @default.
- W2892444866 cites W1990590570 @default.
- W2892444866 cites W1992214368 @default.
- W2892444866 cites W1993726249 @default.
- W2892444866 cites W1996457200 @default.
- W2892444866 cites W1996778131 @default.
- W2892444866 cites W1996891655 @default.
- W2892444866 cites W1997135879 @default.
- W2892444866 cites W1997455728 @default.
- W2892444866 cites W1997893227 @default.
- W2892444866 cites W1997895029 @default.
- W2892444866 cites W1998077837 @default.
- W2892444866 cites W2000257455 @default.
- W2892444866 cites W2001253578 @default.
- W2892444866 cites W2001970512 @default.
- W2892444866 cites W2003384436 @default.
- W2892444866 cites W2004678782 @default.
- W2892444866 cites W2012323710 @default.
- W2892444866 cites W2012830962 @default.
- W2892444866 cites W2015303573 @default.
- W2892444866 cites W2018719548 @default.
- W2892444866 cites W2019181444 @default.
- W2892444866 cites W2025130109 @default.
- W2892444866 cites W2026338945 @default.
- W2892444866 cites W2029165436 @default.
- W2892444866 cites W2031755031 @default.
- W2892444866 cites W2033530463 @default.
- W2892444866 cites W2034038126 @default.
- W2892444866 cites W2034167242 @default.
- W2892444866 cites W2039876964 @default.
- W2892444866 cites W2041109539 @default.
- W2892444866 cites W2044202643 @default.
- W2892444866 cites W2045204781 @default.
- W2892444866 cites W2047005008 @default.
- W2892444866 cites W2047341547 @default.
- W2892444866 cites W2049333188 @default.
- W2892444866 cites W2050166373 @default.
- W2892444866 cites W2053767920 @default.
- W2892444866 cites W2057450019 @default.
- W2892444866 cites W2058212512 @default.
- W2892444866 cites W2058878931 @default.
- W2892444866 cites W2059174139 @default.
- W2892444866 cites W2061067611 @default.
- W2892444866 cites W2062159969 @default.
- W2892444866 cites W2064490992 @default.
- W2892444866 cites W2064727296 @default.
- W2892444866 cites W2066998865 @default.
- W2892444866 cites W2068340340 @default.
- W2892444866 cites W2069966822 @default.
- W2892444866 cites W2070989241 @default.
- W2892444866 cites W2072412859 @default.
- W2892444866 cites W2076699551 @default.
- W2892444866 cites W2083170339 @default.
- W2892444866 cites W2083550208 @default.
- W2892444866 cites W2083946646 @default.
- W2892444866 cites W2084289630 @default.
- W2892444866 cites W2084305298 @default.