FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2894531187> ?p ?o ?g. }

• W2894531187 abstract "Hybridization and introgression are common phenomena among oak species. These processes can be beneficial by introducing favorable genetic variants across species (adaptive introgression). Given that drought is an important stress, impacting physiological and morphological variation and limiting distributions, our goal was to identify drought-related genes that might exhibit patterns of introgression influenced by natural selection. Using RNAseq, we sequenced whole transcriptomes of 24 individuals from three oaks in southern California: (Quercus engelmannii, Quercus berberidifolia, Quercus cornelius-mulleri) and identified genetic variants to estimate admixture rates of all variants and those in drought genes.We found 398,042 variants across all loci and 4352 variants in 139 drought candidate genes. STRUCTURE analysis of all variants revealed the majority of our samples were assignable to a single species, but with several highly admixed individuals. When using drought-associated variants, the same individuals exhibited less admixture and their allele frequencies were more polarized between Engelmann and scrub oaks than when using the total gene set. These findings are consistent with the hypothesis that selection may act differently on functional genes, such as drought-associated genes, and point to candidate genes that are suggestive of divergent selection among species maintaining adaptive differences. For example, the drought genes that showed the strongest bias against engelmannii-fixed oak variants in scrub oaks were related to sugar transporter, coumarate-coA ligases, glutathione S-conjugation, and stress response.This pilot study illustrates that whole transcriptomes of individuals will provide useful data for identifying functional genes that contribute to adaptive divergence among hybridizing species." @default.
• W2894531187 created "2018-10-05" @default.
• W2894531187 creator A5000351218 @default.
• W2894531187 creator A5010751254 @default.
• W2894531187 creator A5045863918 @default.
• W2894531187 creator A5051102328 @default.
• W2894531187 creator A5079585848 @default.
• W2894531187 date "2018-10-01" @default.
• W2894531187 modified "2023-10-16" @default.
• W2894531187 title "Assessment of shared alleles in drought-associated candidate genes among southern California white oak species (Quercus sect. Quercus)" @default.
• W2894531187 cites W1510699761 @default.
• W2894531187 cites W1843238398 @default.
• W2894531187 cites W1970987566 @default.
• W2894531187 cites W1981509058 @default.
• W2894531187 cites W1983265838 @default.
• W2894531187 cites W2014489964 @default.
• W2894531187 cites W2021341670 @default.
• W2894531187 cites W2033692122 @default.
• W2894531187 cites W2035839217 @default.
• W2894531187 cites W2049251348 @default.
• W2894531187 cites W2053150604 @default.
• W2894531187 cites W2053230205 @default.
• W2894531187 cites W2056726501 @default.
• W2894531187 cites W2063561659 @default.
• W2894531187 cites W2075491221 @default.
• W2894531187 cites W2083882065 @default.
• W2894531187 cites W2091458978 @default.
• W2894531187 cites W2096800004 @default.
• W2894531187 cites W2098126593 @default.
• W2894531187 cites W2099085143 @default.
• W2894531187 cites W2102596322 @default.
• W2894531187 cites W2102619694 @default.
• W2894531187 cites W2103441770 @default.
• W2894531187 cites W2103467395 @default.
• W2894531187 cites W2106780701 @default.
• W2894531187 cites W2108078280 @default.
• W2894531187 cites W2111487839 @default.
• W2894531187 cites W2111681569 @default.
• W2894531187 cites W2113818400 @default.
• W2894531187 cites W2119180969 @default.
• W2894531187 cites W2119255538 @default.
• W2894531187 cites W2121512231 @default.
• W2894531187 cites W2142563884 @default.
• W2894531187 cites W2144504271 @default.
• W2894531187 cites W2145416306 @default.
• W2894531187 cites W2149992227 @default.
• W2894531187 cites W2155645861 @default.
• W2894531187 cites W2161339576 @default.
• W2894531187 cites W2161844873 @default.
• W2894531187 cites W2171653557 @default.
• W2894531187 cites W2228425772 @default.
• W2894531187 cites W2240063925 @default.
• W2894531187 cites W2281815249 @default.
• W2894531187 cites W2318135165 @default.
• W2894531187 cites W2529831526 @default.
• W2894531187 cites W2530775645 @default.
• W2894531187 cites W2562075734 @default.
• W2894531187 cites W2597711052 @default.
• W2894531187 cites W2739999456 @default.
• W2894531187 cites W2779273494 @default.
• W2894531187 cites W2891398535 @default.
• W2894531187 doi "https://doi.org/10.1186/s12863-018-0677-9" @default.
• W2894531187 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6167808" @default.
• W2894531187 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30285631" @default.
• W2894531187 hasPublicationYear "2018" @default.
• W2894531187 type Work @default.
• W2894531187 sameAs 2894531187 @default.
• W2894531187 citedByCount "14" @default.
• W2894531187 countsByYear W28945311872019 @default.
• W2894531187 countsByYear W28945311872020 @default.
• W2894531187 countsByYear W28945311872021 @default.
• W2894531187 countsByYear W28945311872022 @default.
• W2894531187 crossrefType "journal-article" @default.
• W2894531187 hasAuthorship W2894531187A5000351218 @default.
• W2894531187 hasAuthorship W2894531187A5010751254 @default.
• W2894531187 hasAuthorship W2894531187A5045863918 @default.
• W2894531187 hasAuthorship W2894531187A5051102328 @default.
• W2894531187 hasAuthorship W2894531187A5079585848 @default.
• W2894531187 hasBestOaLocation W28945311871 @default.
• W2894531187 hasConcept C104317684 @default.
• W2894531187 hasConcept C137848329 @default.
• W2894531187 hasConcept C144024400 @default.
• W2894531187 hasConcept C149923435 @default.
• W2894531187 hasConcept C154945302 @default.
• W2894531187 hasConcept C180754005 @default.
• W2894531187 hasConcept C193262319 @default.
• W2894531187 hasConcept C2908647359 @default.
• W2894531187 hasConcept C41008148 @default.
• W2894531187 hasConcept C54355233 @default.
• W2894531187 hasConcept C69991583 @default.
• W2894531187 hasConcept C78458016 @default.
• W2894531187 hasConcept C8182607 @default.
• W2894531187 hasConcept C81917197 @default.
• W2894531187 hasConcept C86803240 @default.
• W2894531187 hasConceptScore W2894531187C104317684 @default.
• W2894531187 hasConceptScore W2894531187C137848329 @default.
• W2894531187 hasConceptScore W2894531187C144024400 @default.
• W2894531187 hasConceptScore W2894531187C149923435 @default.
• W2894531187 hasConceptScore W2894531187C154945302 @default.
• W2894531187 hasConceptScore W2894531187C180754005 @default.

• next