Matches in SemOpenAlex for { <https://semopenalex.org/work/W2897782355> ?p ?o ?g. }
Showing items 1 to 98 of
98
with 100 items per page.
- W2897782355 abstract "Abstract Motivation Phylogenies are important for fundamental biological research, but also have numerous applications in biotechnology, agriculture, and medicine. Finding the optimal tree under the popular maximum like-lihood (ML) criterion is known to be NP-hard. Thus, highly optimized and scalable codes are needed to analyze constantly growing empirical datasets. Results We present RAxML-NG, a from scratch re-implementation of the established greedy tree search algorithm of RAxML/ExaML. RAxML- NG offers improved accuracy, flexibility, speed, scalability, and usability compared to RAxML/ExaML. On taxon-rich datasets, RAxML-NG typically finds higher-scoring trees than IQTree, an increasingly popular recent tool for ML-based phylogenetic inference (although IQ-Tree shows better stability). Finally, RAxML-NG introduces several new features, such as the detection of terraces in tree space and a the recently introduced transfer bootstrap support metric. Availability The code is available under GNU GPL at https://github.com/amkozlov/raxml-ng.RAxML-NG web service (maintained by Vital- IT) is available at https://raxml-ng.vital-it.ch/ . Contact alexey.kozlov@h-its.org" @default.
- W2897782355 created "2018-10-26" @default.
- W2897782355 creator A5024578874 @default.
- W2897782355 creator A5025640090 @default.
- W2897782355 creator A5083612795 @default.
- W2897782355 creator A5084095365 @default.
- W2897782355 creator A5087352477 @default.
- W2897782355 date "2018-10-18" @default.
- W2897782355 modified "2023-10-17" @default.
- W2897782355 title "RAxML-NG: A fast, scalable, and user-friendly tool for maximum likelihood phylogenetic inference" @default.
- W2897782355 cites W1957469265 @default.
- W2897782355 cites W2016171324 @default.
- W2897782355 cites W2095523744 @default.
- W2897782355 cites W2100030044 @default.
- W2897782355 cites W2111211467 @default.
- W2897782355 cites W2111485477 @default.
- W2897782355 cites W2111647009 @default.
- W2897782355 cites W2141052558 @default.
- W2897782355 cites W2168736508 @default.
- W2897782355 cites W2171233023 @default.
- W2897782355 cites W2765708000 @default.
- W2897782355 cites W2795360781 @default.
- W2897782355 cites W2801900613 @default.
- W2897782355 cites W28399727 @default.
- W2897782355 cites W2949367299 @default.
- W2897782355 cites W3142322755 @default.
- W2897782355 doi "https://doi.org/10.1101/447110" @default.
- W2897782355 hasPublicationYear "2018" @default.
- W2897782355 type Work @default.
- W2897782355 sameAs 2897782355 @default.
- W2897782355 citedByCount "70" @default.
- W2897782355 countsByYear W28977823552018 @default.
- W2897782355 countsByYear W28977823552019 @default.
- W2897782355 countsByYear W28977823552020 @default.
- W2897782355 countsByYear W28977823552021 @default.
- W2897782355 countsByYear W28977823552022 @default.
- W2897782355 countsByYear W28977823552023 @default.
- W2897782355 crossrefType "posted-content" @default.
- W2897782355 hasAuthorship W2897782355A5024578874 @default.
- W2897782355 hasAuthorship W2897782355A5025640090 @default.
- W2897782355 hasAuthorship W2897782355A5083612795 @default.
- W2897782355 hasAuthorship W2897782355A5084095365 @default.
- W2897782355 hasAuthorship W2897782355A5087352477 @default.
- W2897782355 hasBestOaLocation W28977823551 @default.
- W2897782355 hasConcept C111919701 @default.
- W2897782355 hasConcept C113174947 @default.
- W2897782355 hasConcept C11413529 @default.
- W2897782355 hasConcept C127413603 @default.
- W2897782355 hasConcept C134306372 @default.
- W2897782355 hasConcept C140745168 @default.
- W2897782355 hasConcept C154945302 @default.
- W2897782355 hasConcept C170130773 @default.
- W2897782355 hasConcept C176217482 @default.
- W2897782355 hasConcept C177264268 @default.
- W2897782355 hasConcept C199360897 @default.
- W2897782355 hasConcept C21547014 @default.
- W2897782355 hasConcept C2776214188 @default.
- W2897782355 hasConcept C2776760102 @default.
- W2897782355 hasConcept C33923547 @default.
- W2897782355 hasConcept C41008148 @default.
- W2897782355 hasConcept C48044578 @default.
- W2897782355 hasConceptScore W2897782355C111919701 @default.
- W2897782355 hasConceptScore W2897782355C113174947 @default.
- W2897782355 hasConceptScore W2897782355C11413529 @default.
- W2897782355 hasConceptScore W2897782355C127413603 @default.
- W2897782355 hasConceptScore W2897782355C134306372 @default.
- W2897782355 hasConceptScore W2897782355C140745168 @default.
- W2897782355 hasConceptScore W2897782355C154945302 @default.
- W2897782355 hasConceptScore W2897782355C170130773 @default.
- W2897782355 hasConceptScore W2897782355C176217482 @default.
- W2897782355 hasConceptScore W2897782355C177264268 @default.
- W2897782355 hasConceptScore W2897782355C199360897 @default.
- W2897782355 hasConceptScore W2897782355C21547014 @default.
- W2897782355 hasConceptScore W2897782355C2776214188 @default.
- W2897782355 hasConceptScore W2897782355C2776760102 @default.
- W2897782355 hasConceptScore W2897782355C33923547 @default.
- W2897782355 hasConceptScore W2897782355C41008148 @default.
- W2897782355 hasConceptScore W2897782355C48044578 @default.
- W2897782355 hasLocation W28977823551 @default.
- W2897782355 hasLocation W28977823552 @default.
- W2897782355 hasLocation W28977823553 @default.
- W2897782355 hasLocation W28977823554 @default.
- W2897782355 hasOpenAccess W2897782355 @default.
- W2897782355 hasPrimaryLocation W28977823551 @default.
- W2897782355 hasRelatedWork W1525643724 @default.
- W2897782355 hasRelatedWork W2067938758 @default.
- W2897782355 hasRelatedWork W2100369842 @default.
- W2897782355 hasRelatedWork W2302028273 @default.
- W2897782355 hasRelatedWork W2333420780 @default.
- W2897782355 hasRelatedWork W2364921833 @default.
- W2897782355 hasRelatedWork W2382623646 @default.
- W2897782355 hasRelatedWork W3087771547 @default.
- W2897782355 hasRelatedWork W3098095624 @default.
- W2897782355 hasRelatedWork W4205427655 @default.
- W2897782355 isParatext "false" @default.
- W2897782355 isRetracted "false" @default.
- W2897782355 magId "2897782355" @default.
- W2897782355 workType "article" @default.