Matches in SemOpenAlex for { <https://semopenalex.org/work/W2901708373> ?p ?o ?g. }
- W2901708373 endingPage "230" @default.
- W2901708373 startingPage "222" @default.
- W2901708373 abstract "Southern catfish ( Silurus meridionalis ) is an economically important species widely cultured in China. It is well known for its fast growth, strong resistance to diseases and euryphage. However, little is known about the mechanisms for its powerful immune systems. Our Fish-T1K project has finished its first phase of 200 fish transcriptomes, with sequencing of gills in most examined fishes. In this study, we performed transcriptome sequencing of the gill and the maxillary barbel of Southern catfish, with the latter as a control. High expression of immune-related transcripts were observed in these two tissues. We observed that genes in the T cell receptor signaling pathway had higher transcription values in the gill than in the barbel. In addition, eight new rhamnose-binding lectins (RBLs) were identified and their carbohydrate recognition domains (CRDs) were classified according to the eight conserved cysteine residues and two conserved motifs (-YGR- and -DPC-). This is the first transcriptome report by high-throughput sequencing of the Southern catfish. Our genomic data and discovery of novel RBLs in this project should be able to promote better understandings of the roles of gills in immune responses and disease prevention for further aquaculture. • This is the first transcriptome report by high-throughput sequencing of the economically important Southern catfish. • Genes in the T cell receptor signaling pathway had higher transcription values in the gill than in the barbel. • Eight RBL s were firstly identified in Southern catfish. This gene copy number is among the largest in most examined fish. • CRDs of the RBL s were classified according to the eight cysteine residues and two conserved motifs (-YGR- and -DPC-). • Our findings promote better understanding of the roles of gills in immune responses and disease prevention for aquaculture." @default.
- W2901708373 created "2018-11-29" @default.
- W2901708373 creator A5015102287 @default.
- W2901708373 creator A5025396939 @default.
- W2901708373 creator A5035684125 @default.
- W2901708373 creator A5041615881 @default.
- W2901708373 date "2019-05-01" @default.
- W2901708373 modified "2023-10-04" @default.
- W2901708373 title "Transcriptome sequencing of the gill and barbel of Southern catfish (Silurus meridionalis) revealed immune responses and novel rhamnose-binding lectins (RBLs)" @default.
- W2901708373 cites W1036640720 @default.
- W2901708373 cites W1514067076 @default.
- W2901708373 cites W1527927437 @default.
- W2901708373 cites W1563962691 @default.
- W2901708373 cites W1565491355 @default.
- W2901708373 cites W1979476616 @default.
- W2901708373 cites W1979899211 @default.
- W2901708373 cites W1982580709 @default.
- W2901708373 cites W1983256420 @default.
- W2901708373 cites W1985420289 @default.
- W2901708373 cites W1985920205 @default.
- W2901708373 cites W1996172282 @default.
- W2901708373 cites W1996386189 @default.
- W2901708373 cites W1998151598 @default.
- W2901708373 cites W1999574084 @default.
- W2901708373 cites W2001716606 @default.
- W2901708373 cites W2002019043 @default.
- W2901708373 cites W2002374476 @default.
- W2901708373 cites W2004281070 @default.
- W2901708373 cites W2005033363 @default.
- W2901708373 cites W2005689500 @default.
- W2901708373 cites W2011657487 @default.
- W2901708373 cites W2015329433 @default.
- W2901708373 cites W2015571734 @default.
- W2901708373 cites W2018273985 @default.
- W2901708373 cites W2025651022 @default.
- W2901708373 cites W2047336009 @default.
- W2901708373 cites W2048088399 @default.
- W2901708373 cites W2050973192 @default.
- W2901708373 cites W2056516296 @default.
- W2901708373 cites W2064654568 @default.
- W2901708373 cites W2068949344 @default.
- W2901708373 cites W2074634155 @default.
- W2901708373 cites W2074865381 @default.
- W2901708373 cites W2076850032 @default.
- W2901708373 cites W2079092101 @default.
- W2901708373 cites W2083824794 @default.
- W2901708373 cites W2088282707 @default.
- W2901708373 cites W2091614026 @default.
- W2901708373 cites W2094988982 @default.
- W2901708373 cites W2099887519 @default.
- W2901708373 cites W2101972919 @default.
- W2901708373 cites W2117385081 @default.
- W2901708373 cites W2121425239 @default.
- W2901708373 cites W2126451115 @default.
- W2901708373 cites W2133790733 @default.
- W2901708373 cites W2134099010 @default.
- W2901708373 cites W2134884876 @default.
- W2901708373 cites W2138140504 @default.
- W2901708373 cites W2139760555 @default.
- W2901708373 cites W2141458291 @default.
- W2901708373 cites W2143372313 @default.
- W2901708373 cites W2146516445 @default.
- W2901708373 cites W2158175056 @default.
- W2901708373 cites W2188912780 @default.
- W2901708373 cites W2216625380 @default.
- W2901708373 cites W2234529551 @default.
- W2901708373 cites W2278041840 @default.
- W2901708373 cites W2297883954 @default.
- W2901708373 cites W2311203695 @default.
- W2901708373 cites W2319193248 @default.
- W2901708373 cites W2345962438 @default.
- W2901708373 cites W2510945666 @default.
- W2901708373 cites W2586524778 @default.
- W2901708373 cites W2767491641 @default.
- W2901708373 cites W2803572653 @default.
- W2901708373 cites W4213149192 @default.
- W2901708373 cites W4294216483 @default.
- W2901708373 doi "https://doi.org/10.1016/j.ygeno.2018.11.018" @default.
- W2901708373 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30465915" @default.
- W2901708373 hasPublicationYear "2019" @default.
- W2901708373 type Work @default.
- W2901708373 sameAs 2901708373 @default.
- W2901708373 citedByCount "7" @default.
- W2901708373 countsByYear W29017083732021 @default.
- W2901708373 countsByYear W29017083732022 @default.
- W2901708373 countsByYear W29017083732023 @default.
- W2901708373 crossrefType "journal-article" @default.
- W2901708373 hasAuthorship W2901708373A5015102287 @default.
- W2901708373 hasAuthorship W2901708373A5025396939 @default.
- W2901708373 hasAuthorship W2901708373A5035684125 @default.
- W2901708373 hasAuthorship W2901708373A5041615881 @default.
- W2901708373 hasConcept C104317684 @default.
- W2901708373 hasConcept C150194340 @default.
- W2901708373 hasConcept C161039048 @default.
- W2901708373 hasConcept C162317418 @default.
- W2901708373 hasConcept C2778189562 @default.
- W2901708373 hasConcept C2909208804 @default.
- W2901708373 hasConcept C505870484 @default.