FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2905920199> ?p ?o ?g. }

• W2905920199 endingPage "245" @default.
• W2905920199 startingPage "232" @default.
• W2905920199 abstract "Background. Biogenic magnetic nanoparticles (BMNs) were found in organisms that belong to all three domains: prokaryotes, archaea, and eukaryotes. And it was found that the mechanism of biomineralization of BMN is the same for all living organisms. BMNs have been experimentally detected in algae and protozoa, worms, сhitons, snails, ants and butterflies, honey bees, termites, lobsters, tritons, migratory and non-migratory fish, turtles, birds, bats, dolphins and whales, humans, plants and mushrooms. The study of the presence of BMNs in representatives of the kingdom of the Fungi is not numerous, as well as an idea of the functions they perform. In particular, a small amount of bioinformatic research was caused by the absence of decrypted fungi genomes in databases. In total, there are 10 divisions of the kingdom Fungi, of which not a single division has been analyzed completely. The study of fungi, which are representatives of different parts of the kingdom Fungi has fundamental and practical interest. From a fundamental point of view, identifying potential producers of BMNs among fungi can help find an answer to an open-ended question about the functional purpose of BMNs in various organisms. From a practical point of view, the identification of potential producers of BMNs among fungi is promising for the manufacture of magnetically controlled sorbent based on the biomass of fungi. Two of the most abundant sections of fungi – Ascomycetes (Ascomycota) and Basidiomycetes (Basidiomycota), which genomes are widely represented in bioinformatic databases were selected to the study.Objective. The aim of the is to identify potential producers of BMNs among the representatives of higher fungi by methods of comparative genomics and experimental research using atomic force microscopy (AFM) and magnetic force microscopy (MFM) of samples of higher fungi tissue for the presence of BMN in them.Methods. The method of pairwise alignment of the amino acid sequences of the fungi proteins with Magnetospirillum gryphiswaldense MSR-1 proteins by using BLAST program of National Center for Biotechnology Information (NCBI, USA). Methods for AFM and MFM were used to study the fruiting bodies of fungi for the presence of BMNs.Results. Bioinformatic analysis of 160 species of fungi of the Ascomycota division and 63 species of fungi of the Basidiomycota division was carried out and selected to analyze the alignment results for 15 representatives each, since their genome was deciphered by more than 50% in the database of the GenBank NCBI and functions of homologous proteins are known. For the analysis of the conducted research results, the following indicators were used: the value of the E-number (the number of alignments with the same or better alignment weight that can be found by chance in a database of a certain size), Іdent – the percentage of amino acid sequence overlapping within which the alignment is made, Length – the number of identical amino acid residues of the proteins, compared at optimal alignment and the function of the aligned proteins. When Ident > 18%, E-number ≤ 0.05, Length > 100, it can be argued that the sequences are homologous, and the fungus is a potential producer of BMN.Conclusions. Using the methods of comparative genomics, it is shown that among the studied representatives of higher fungi of the Ascomycota and Basidiomycota division, which genomes are decoded by more than 50% in the GenBank NCBI database, all species are potential producers of BMNs. At the same time, experimental studies of BMNs in A. bisporus and L. edodes fungi using the methods of AFM and MSM showed that BMNs in fungi form chains localized on the walls of the hyphae of the investigated fungi samples." @default.
• W2905920199 created "2019-01-01" @default.
• W2905920199 creator A5014339076 @default.
• W2905920199 creator A5045583282 @default.
• W2905920199 creator A5076168996 @default.
• W2905920199 creator A5077583377 @default.
• W2905920199 date "2018-12-20" @default.
• W2905920199 modified "2023-10-01" @default.
• W2905920199 title "Determination of Potential Producers of Biogenic Magnetic Nanoparticles Among the Fungi Representatives of Ascomycota and Basidiomycota Divisions" @default.
• W2905920199 cites W1537352844 @default.
• W2905920199 cites W1635563208 @default.
• W2905920199 cites W1674883404 @default.
• W2905920199 cites W1887078085 @default.
• W2905920199 cites W1970304507 @default.
• W2905920199 cites W1970713558 @default.
• W2905920199 cites W1975275474 @default.
• W2905920199 cites W1978282949 @default.
• W2905920199 cites W1998850739 @default.
• W2905920199 cites W1999146951 @default.
• W2905920199 cites W2004873568 @default.
• W2905920199 cites W2005208321 @default.
• W2905920199 cites W2018315683 @default.
• W2905920199 cites W2021283177 @default.
• W2905920199 cites W2023413661 @default.
• W2905920199 cites W2027624111 @default.
• W2905920199 cites W2034887219 @default.
• W2905920199 cites W2037383689 @default.
• W2905920199 cites W2039026386 @default.
• W2905920199 cites W2044084407 @default.
• W2905920199 cites W2053742509 @default.
• W2905920199 cites W2055651454 @default.
• W2905920199 cites W2064504642 @default.
• W2905920199 cites W2082135766 @default.
• W2905920199 cites W2084851774 @default.
• W2905920199 cites W2094436239 @default.
• W2905920199 cites W2096004218 @default.
• W2905920199 cites W2099752223 @default.
• W2905920199 cites W2110114094 @default.
• W2905920199 cites W2110477579 @default.
• W2905920199 cites W2121206925 @default.
• W2905920199 cites W2126849671 @default.
• W2905920199 cites W2130523856 @default.
• W2905920199 cites W2138473434 @default.
• W2905920199 cites W2138510848 @default.
• W2905920199 cites W2152248833 @default.
• W2905920199 cites W2159305569 @default.
• W2905920199 cites W2164741633 @default.
• W2905920199 cites W2165055032 @default.
• W2905920199 cites W2171095135 @default.
• W2905920199 cites W2279951720 @default.
• W2905920199 cites W2321104020 @default.
• W2905920199 cites W2473025246 @default.
• W2905920199 cites W2625379203 @default.
• W2905920199 cites W2763128136 @default.
• W2905920199 cites W2790902179 @default.
• W2905920199 cites W2794848908 @default.
• W2905920199 cites W2795049881 @default.
• W2905920199 cites W2795331773 @default.
• W2905920199 cites W4236185483 @default.
• W2905920199 cites W929958748 @default.
• W2905920199 doi "https://doi.org/10.20535/ibb.2018.2.4.147310" @default.
• W2905920199 hasPublicationYear "2018" @default.
• W2905920199 type Work @default.
• W2905920199 sameAs 2905920199 @default.
• W2905920199 citedByCount "3" @default.
• W2905920199 countsByYear W29059201992019 @default.
• W2905920199 countsByYear W29059201992020 @default.
• W2905920199 countsByYear W29059201992021 @default.
• W2905920199 crossrefType "journal-article" @default.
• W2905920199 hasAuthorship W2905920199A5014339076 @default.
• W2905920199 hasAuthorship W2905920199A5045583282 @default.
• W2905920199 hasAuthorship W2905920199A5076168996 @default.
• W2905920199 hasAuthorship W2905920199A5077583377 @default.
• W2905920199 hasBestOaLocation W29059201991 @default.
• W2905920199 hasConcept C104317684 @default.
• W2905920199 hasConcept C151730666 @default.
• W2905920199 hasConcept C18903297 @default.
• W2905920199 hasConcept C196405362 @default.
• W2905920199 hasConcept C2776923041 @default.
• W2905920199 hasConcept C2778653143 @default.
• W2905920199 hasConcept C2781212518 @default.
• W2905920199 hasConcept C523546767 @default.
• W2905920199 hasConcept C55493867 @default.
• W2905920199 hasConcept C59822182 @default.
• W2905920199 hasConcept C86803240 @default.
• W2905920199 hasConcept C91066513 @default.
• W2905920199 hasConceptScore W2905920199C104317684 @default.
• W2905920199 hasConceptScore W2905920199C151730666 @default.
• W2905920199 hasConceptScore W2905920199C18903297 @default.
• W2905920199 hasConceptScore W2905920199C196405362 @default.
• W2905920199 hasConceptScore W2905920199C2776923041 @default.
• W2905920199 hasConceptScore W2905920199C2778653143 @default.
• W2905920199 hasConceptScore W2905920199C2781212518 @default.
• W2905920199 hasConceptScore W2905920199C523546767 @default.
• W2905920199 hasConceptScore W2905920199C55493867 @default.
• W2905920199 hasConceptScore W2905920199C59822182 @default.
• W2905920199 hasConceptScore W2905920199C86803240 @default.
• W2905920199 hasConceptScore W2905920199C91066513 @default.

• next