FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2920882904> ?p ?o ?g. }

• W2920882904 abstract "Abstract The last decade brought a still growing experimental evidence of mobilome impact on host’s gene expression. We systematically analysed genomic location of transposable elements (TEs) in 625 publicly available fungal genomes from the NCBI database in order to explore their potential roles in genome evolution and correlation with species’ lifestyle. We found that non-autonomous TEs and remnant copies are evenly distributed across genomes. In consequence, they also massively overlap with regions annotated as genes, which suggests a great contribution of TE-derived sequences to host’s coding genome. Younger and potentially active TEs cluster with one another away from genic regions. This non-randomness is a sign of either selection against insertion of TEs in gene proximity or target site preference among some types of TEs. Proteins encoded by genes with old transposable elements insertions have significantly less repeat and protein-protein interaction motifs but are richer in enzymatic domains. However, genes only proximal to TEs do not display any functional enrichment. Our findings show that adaptive cases of TE insertion remain a marginal phenomenon, and the overwhelming majority of TEs are evolving neutrally. Eventually, animal-related and pathogenic fungi have more TEs inserted into genes than fungi with other lifestyles. This is the first systematic, kingdom-wide study concerning mobile elements and their genomic neighbourhood. The obtained results should inspire further research concerning the roles TEs played in evolution and how they shape the life we know today." @default.
• W2920882904 created "2019-03-22" @default.
• W2920882904 creator A5016232823 @default.
• W2920882904 creator A5019627547 @default.
• W2920882904 creator A5040454338 @default.
• W2920882904 creator A5044789608 @default.
• W2920882904 date "2019-03-13" @default.
• W2920882904 modified "2023-10-09" @default.
• W2920882904 title "Transposable elements contribute to fungal genes and impact fungal lifestyle" @default.
• W2920882904 cites W1970091573 @default.
• W2920882904 cites W1977640433 @default.
• W2920882904 cites W1978212368 @default.
• W2920882904 cites W1985204564 @default.
• W2920882904 cites W1988714210 @default.
• W2920882904 cites W1999930403 @default.
• W2920882904 cites W2001671544 @default.
• W2920882904 cites W2023968980 @default.
• W2920882904 cites W2024848067 @default.
• W2920882904 cites W2026519705 @default.
• W2920882904 cites W2035260243 @default.
• W2920882904 cites W2036370616 @default.
• W2920882904 cites W2036666081 @default.
• W2920882904 cites W2054521621 @default.
• W2920882904 cites W2055821541 @default.
• W2920882904 cites W2059864757 @default.
• W2920882904 cites W2065659588 @default.
• W2920882904 cites W2095406747 @default.
• W2920882904 cites W2101756535 @default.
• W2920882904 cites W2111283734 @default.
• W2920882904 cites W2116811037 @default.
• W2920882904 cites W2134607751 @default.
• W2920882904 cites W2137455182 @default.
• W2920882904 cites W2148239117 @default.
• W2920882904 cites W2152458080 @default.
• W2920882904 cites W2155496026 @default.
• W2920882904 cites W2158195770 @default.
• W2920882904 cites W2164461702 @default.
• W2920882904 cites W2170518375 @default.
• W2920882904 cites W2170747616 @default.
• W2920882904 cites W2171468101 @default.
• W2920882904 cites W2224056471 @default.
• W2920882904 cites W2273647910 @default.
• W2920882904 cites W2279891355 @default.
• W2920882904 cites W2341609891 @default.
• W2920882904 cites W2399841009 @default.
• W2920882904 cites W2440084210 @default.
• W2920882904 cites W2468803195 @default.
• W2920882904 cites W2562949350 @default.
• W2920882904 cites W2575123779 @default.
• W2920882904 cites W2580206734 @default.
• W2920882904 cites W2596368986 @default.
• W2920882904 cites W2598420055 @default.
• W2920882904 cites W2613576825 @default.
• W2920882904 cites W2728549768 @default.
• W2920882904 cites W2740612628 @default.
• W2920882904 cites W2742822384 @default.
• W2920882904 cites W2744893847 @default.
• W2920882904 cites W2760275602 @default.
• W2920882904 cites W2767660457 @default.
• W2920882904 cites W2774011916 @default.
• W2920882904 cites W2788072260 @default.
• W2920882904 cites W2789934066 @default.
• W2920882904 cites W2799389113 @default.
• W2920882904 cites W2800905131 @default.
• W2920882904 cites W2801602492 @default.
• W2920882904 cites W2884125637 @default.
• W2920882904 cites W2901901698 @default.
• W2920882904 cites W2950526549 @default.
• W2920882904 cites W2950847039 @default.
• W2920882904 cites W4234797890 @default.
• W2920882904 doi "https://doi.org/10.1038/s41598-019-40965-0" @default.
• W2920882904 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6416283" @default.
• W2920882904 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30867521" @default.
• W2920882904 hasPublicationYear "2019" @default.
• W2920882904 type Work @default.
• W2920882904 sameAs 2920882904 @default.
• W2920882904 citedByCount "48" @default.
• W2920882904 countsByYear W29208829042019 @default.
• W2920882904 countsByYear W29208829042020 @default.
• W2920882904 countsByYear W29208829042021 @default.
• W2920882904 countsByYear W29208829042022 @default.
• W2920882904 countsByYear W29208829042023 @default.
• W2920882904 crossrefType "journal-article" @default.
• W2920882904 hasAuthorship W2920882904A5016232823 @default.
• W2920882904 hasAuthorship W2920882904A5019627547 @default.
• W2920882904 hasAuthorship W2920882904A5040454338 @default.
• W2920882904 hasAuthorship W2920882904A5044789608 @default.
• W2920882904 hasBestOaLocation W29208829041 @default.
• W2920882904 hasConcept C104317684 @default.
• W2920882904 hasConcept C132533263 @default.
• W2920882904 hasConcept C141231307 @default.
• W2920882904 hasConcept C174600577 @default.
• W2920882904 hasConcept C4918238 @default.
• W2920882904 hasConcept C54355233 @default.
• W2920882904 hasConcept C70721500 @default.
• W2920882904 hasConcept C78458016 @default.
• W2920882904 hasConcept C86803240 @default.
• W2920882904 hasConceptScore W2920882904C104317684 @default.
• W2920882904 hasConceptScore W2920882904C132533263 @default.
• W2920882904 hasConceptScore W2920882904C141231307 @default.

• next