FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2922002725> ?p ?o ?g. }

• W2922002725 abstract "The soil-borne pathogenic Ralstonia solanacearum species complex (RSSC) is a group of plant pathogens that is economically destructive worldwide and has a broad host range, including various solanaceae plants, banana, ginger, sesame, and clove. Previously, Korean RSSC strains isolated from samples of potato bacterial wilt were grouped into four pathotypes based on tests against potato, tomato, eggplant, and pepper. In this study, we sequenced the genomes of 25 Korean RSSC strains selected based on these pathotypes. The newly sequenced genomes were analyzed to determine the phylogenetic relationships between the strains with average nucleotide identity (ANI) values, and structurally compared via multiple genome alignment using Mauve software. To identify candidate genes responsible for the host specificity of the pathotypes, functional genome comparisons were conducted by analyzing pan-genome orthologous group (POG) and type III secretion system effectors (T3es). POG analyses revealed that a total of 128 genes were shared only in tomato-nonpathogenic strains, 8 genes in tomato-pathogenic strains, 5 genes in eggplant-nonpathogenic strains, 7 genes in eggplant-pathogenic strains, 1 gene in pepper-nonpathogenic strains, and 34 genes in pepper-pathogenic strains. When we analyzed T3es, three host-specific effectors were predicted: RipS3 (SKWP3) and RipH3 (HLK3) were found only in tomato-pathogenic strains, and RipAC (PopC) were found only in eggplant-pathogenic strains. Overall, we identified host-specific genes and effectors that may be responsible for virulence functions in RSSC in silico. The expected characters of those genes suggest that the host range of RSSC is determined by the comprehensive actions of various virulence factors, including effectors, secretion systems, and metabolic enzymes." @default.
• W2922002725 created "2019-03-22" @default.
• W2922002725 creator A5004854316 @default.
• W2922002725 creator A5017305706 @default.
• W2922002725 creator A5023637219 @default.
• W2922002725 creator A5024560260 @default.
• W2922002725 creator A5034859337 @default.
• W2922002725 creator A5035423266 @default.
• W2922002725 creator A5040776676 @default.
• W2922002725 creator A5043367747 @default.
• W2922002725 creator A5043557759 @default.
• W2922002725 creator A5078483539 @default.
• W2922002725 creator A5083509775 @default.
• W2922002725 date "2019-03-15" @default.
• W2922002725 modified "2023-10-11" @default.
• W2922002725 title "Prediction of Host-Specific Genes by Pan-Genome Analyses of the Korean Ralstonia solanacearum Species Complex" @default.
• W2922002725 cites W1413250608 @default.
• W2922002725 cites W1921379422 @default.
• W2922002725 cites W1972304384 @default.
• W2922002725 cites W1972422447 @default.
• W2922002725 cites W1982459012 @default.
• W2922002725 cites W1983403167 @default.
• W2922002725 cites W1984654391 @default.
• W2922002725 cites W1988922834 @default.
• W2922002725 cites W1989875176 @default.
• W2922002725 cites W1990545041 @default.
• W2922002725 cites W1997337736 @default.
• W2922002725 cites W2004548026 @default.
• W2922002725 cites W2008743610 @default.
• W2922002725 cites W2015583490 @default.
• W2922002725 cites W2021439021 @default.
• W2922002725 cites W2039102431 @default.
• W2922002725 cites W2046456279 @default.
• W2922002725 cites W2050174252 @default.
• W2922002725 cites W2051621818 @default.
• W2922002725 cites W2071398905 @default.
• W2922002725 cites W2085699671 @default.
• W2922002725 cites W2085881499 @default.
• W2922002725 cites W2094494782 @default.
• W2922002725 cites W2094733407 @default.
• W2922002725 cites W2097928864 @default.
• W2922002725 cites W2113742983 @default.
• W2922002725 cites W2113758128 @default.
• W2922002725 cites W2125963417 @default.
• W2922002725 cites W2130352985 @default.
• W2922002725 cites W2133347646 @default.
• W2922002725 cites W2135413308 @default.
• W2922002725 cites W2142401436 @default.
• W2922002725 cites W2146856248 @default.
• W2922002725 cites W2153797980 @default.
• W2922002725 cites W2154669392 @default.
• W2922002725 cites W2160239662 @default.
• W2922002725 cites W2206071891 @default.
• W2922002725 cites W2230405927 @default.
• W2922002725 cites W2299009003 @default.
• W2922002725 cites W2328483020 @default.
• W2922002725 cites W2527824883 @default.
• W2922002725 cites W2546288471 @default.
• W2922002725 cites W2737072173 @default.
• W2922002725 cites W2737391300 @default.
• W2922002725 cites W2749115520 @default.
• W2922002725 cites W2943042370 @default.
• W2922002725 doi "https://doi.org/10.3389/fmicb.2019.00506" @default.
• W2922002725 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6428702" @default.
• W2922002725 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/30930881" @default.
• W2922002725 hasPublicationYear "2019" @default.
• W2922002725 type Work @default.
• W2922002725 sameAs 2922002725 @default.
• W2922002725 citedByCount "20" @default.
• W2922002725 countsByYear W29220027252019 @default.
• W2922002725 countsByYear W29220027252020 @default.
• W2922002725 countsByYear W29220027252021 @default.
• W2922002725 countsByYear W29220027252022 @default.
• W2922002725 countsByYear W29220027252023 @default.
• W2922002725 crossrefType "journal-article" @default.
• W2922002725 hasAuthorship W2922002725A5004854316 @default.
• W2922002725 hasAuthorship W2922002725A5017305706 @default.
• W2922002725 hasAuthorship W2922002725A5023637219 @default.
• W2922002725 hasAuthorship W2922002725A5024560260 @default.
• W2922002725 hasAuthorship W2922002725A5034859337 @default.
• W2922002725 hasAuthorship W2922002725A5035423266 @default.
• W2922002725 hasAuthorship W2922002725A5040776676 @default.
• W2922002725 hasAuthorship W2922002725A5043367747 @default.
• W2922002725 hasAuthorship W2922002725A5043557759 @default.
• W2922002725 hasAuthorship W2922002725A5078483539 @default.
• W2922002725 hasAuthorship W2922002725A5083509775 @default.
• W2922002725 hasBestOaLocation W29220027251 @default.
• W2922002725 hasConcept C104317684 @default.
• W2922002725 hasConcept C126831891 @default.
• W2922002725 hasConcept C141231307 @default.
• W2922002725 hasConcept C144027150 @default.
• W2922002725 hasConcept C193252679 @default.
• W2922002725 hasConcept C2775905019 @default.
• W2922002725 hasConcept C2776242653 @default.
• W2922002725 hasConcept C2776460866 @default.
• W2922002725 hasConcept C2779002231 @default.
• W2922002725 hasConcept C2780675535 @default.
• W2922002725 hasConcept C51785407 @default.
• W2922002725 hasConcept C54355233 @default.
• W2922002725 hasConcept C60987743 @default.

• next