FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2928204023> ?p ?o ?g. }

• W2928204023 abstract "ABSTRACT Background The genus Oryzias is constituted of 35 medaka-fish species each exhibiting various ecological, morphological and physiological peculiarities and adaptations. Beyond of being a comprehensive phylogenetic group for studying intra-genus evolution of several traits like sex determination, behaviour, morphology or adaptation through comparative genomic approaches, all medaka species share many advantages of experimental model organisms including small size and short generation time, transparent embryos and genome editing tools for reverse and forward genetic studies. The Java medaka, Oryzias javanicus , is one of the two species of medaka perfectly adapted for living in brackish/sea-waters. Being an important component of the mangrove ecosystem, O. javanicus is also used as a valuable marine test-fish for ecotoxicology studies. Here, we sequenced and assembled the whole genome of O. javanicus , and anticipate this resource will be catalytic for a wide range of comparative genomic, phylogenetic and functional studies. Findings Complementary sequencing approaches including long-read technology and data integration with a genetic map allowed the final assembly of 908 Mbp of the O. javanicus genome. Further analyses estimate that the O. javanicus genome contains 33% of repeat sequences and has a heterozygosity of 0.96%. The achieved draft assembly contains 525 scaffolds with a total length of 809.7 Mbp, a N50 of 6.3 Mbp and a L50 of 37 scaffolds. We identified 21454 expressed transcripts for a total transcriptome size of 57, 146, 583 bps. Conclusions We provide here a high-quality draft genome assembly of the euryhaline Javafish medaka, and give emphasis on the evolutionary adaptation to salinity." @default.
• W2928204023 created "2019-04-11" @default.
• W2928204023 creator A5006987599 @default.
• W2928204023 creator A5007390701 @default.
• W2928204023 creator A5012477824 @default.
• W2928204023 creator A5021932811 @default.
• W2928204023 creator A5031215616 @default.
• W2928204023 creator A5034004077 @default.
• W2928204023 creator A5040646045 @default.
• W2928204023 creator A5042883089 @default.
• W2928204023 creator A5046897556 @default.
• W2928204023 creator A5049557010 @default.
• W2928204023 creator A5056753466 @default.
• W2928204023 creator A5060564361 @default.
• W2928204023 creator A5069250617 @default.
• W2928204023 creator A5072570498 @default.
• W2928204023 creator A5081356950 @default.
• W2928204023 creator A5084034465 @default.
• W2928204023 creator A5084176996 @default.
• W2928204023 creator A5088828818 @default.
• W2928204023 date "2019-03-29" @default.
• W2928204023 modified "2023-10-16" @default.
• W2928204023 title "Genome sequence of the euryhaline Javafish medaka, Oryzias javanicus: a small aquarium fish model for studies on adaptation to salinity" @default.
• W2928204023 cites W1111607289 @default.
• W2928204023 cites W1767772592 @default.
• W2928204023 cites W1900937478 @default.
• W2928204023 cites W1941956212 @default.
• W2928204023 cites W1973862547 @default.
• W2928204023 cites W1978780481 @default.
• W2928204023 cites W1982855075 @default.
• W2928204023 cites W1989083100 @default.
• W2928204023 cites W1995870402 @default.
• W2928204023 cites W1996434815 @default.
• W2928204023 cites W2001099074 @default.
• W2928204023 cites W2002826852 @default.
• W2928204023 cites W2008776205 @default.
• W2928204023 cites W2019939014 @default.
• W2928204023 cites W2031396216 @default.
• W2928204023 cites W2031619225 @default.
• W2928204023 cites W2036897871 @default.
• W2928204023 cites W2041027318 @default.
• W2928204023 cites W2045204781 @default.
• W2928204023 cites W2046013295 @default.
• W2928204023 cites W2046183549 @default.
• W2928204023 cites W2049147637 @default.
• W2928204023 cites W2052337103 @default.
• W2928204023 cites W2086904892 @default.
• W2928204023 cites W2092490680 @default.
• W2928204023 cites W2096128575 @default.
• W2928204023 cites W2096819533 @default.
• W2928204023 cites W2099753867 @default.
• W2928204023 cites W2102619694 @default.
• W2928204023 cites W2111647009 @default.
• W2928204023 cites W2112814753 @default.
• W2928204023 cites W2115888213 @default.
• W2928204023 cites W2136145671 @default.
• W2928204023 cites W2141458291 @default.
• W2928204023 cites W2149992227 @default.
• W2928204023 cites W2150131459 @default.
• W2928204023 cites W2153214460 @default.
• W2928204023 cites W2153218781 @default.
• W2928204023 cites W2155628349 @default.
• W2928204023 cites W2156841387 @default.
• W2928204023 cites W2159163232 @default.
• W2928204023 cites W2159496605 @default.
• W2928204023 cites W2161528687 @default.
• W2928204023 cites W2169456326 @default.
• W2928204023 cites W2169773990 @default.
• W2928204023 cites W2174364811 @default.
• W2928204023 cites W2216234219 @default.
• W2928204023 cites W2467009323 @default.
• W2928204023 cites W2578072036 @default.
• W2928204023 cites W2744114422 @default.
• W2928204023 cites W2800384536 @default.
• W2928204023 cites W2884243970 @default.
• W2928204023 cites W2949086752 @default.
• W2928204023 cites W2950354111 @default.
• W2928204023 cites W2951464304 @default.
• W2928204023 doi "https://doi.org/10.1101/593673" @default.
• W2928204023 hasPublicationYear "2019" @default.
• W2928204023 type Work @default.
• W2928204023 sameAs 2928204023 @default.
• W2928204023 citedByCount "0" @default.
• W2928204023 crossrefType "posted-content" @default.
• W2928204023 hasAuthorship W2928204023A5006987599 @default.
• W2928204023 hasAuthorship W2928204023A5007390701 @default.
• W2928204023 hasAuthorship W2928204023A5012477824 @default.
• W2928204023 hasAuthorship W2928204023A5021932811 @default.
• W2928204023 hasAuthorship W2928204023A5031215616 @default.
• W2928204023 hasAuthorship W2928204023A5034004077 @default.
• W2928204023 hasAuthorship W2928204023A5040646045 @default.
• W2928204023 hasAuthorship W2928204023A5042883089 @default.
• W2928204023 hasAuthorship W2928204023A5046897556 @default.
• W2928204023 hasAuthorship W2928204023A5049557010 @default.
• W2928204023 hasAuthorship W2928204023A5056753466 @default.
• W2928204023 hasAuthorship W2928204023A5060564361 @default.
• W2928204023 hasAuthorship W2928204023A5069250617 @default.
• W2928204023 hasAuthorship W2928204023A5072570498 @default.
• W2928204023 hasAuthorship W2928204023A5081356950 @default.
• W2928204023 hasAuthorship W2928204023A5084034465 @default.

• next