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- W2942162801 endingPage "e8019" @default.
- W2942162801 startingPage "e8019" @default.
- W2942162801 abstract "MADS-box genes encode transcription factors that participate in various plant growth and development processes, particularly floral organogenesis. To date, MADS-box genes have been reported in many species, the completion of the sequence of the willow genome provides us with the opportunity to conduct a comprehensive analysis of the willow MADS-box gene family. Here, we identified 60 willow MADS-box genes using bioinformatics-based methods and classified them into 22 M-type (11 Mα, seven Mβ and four Mγ) and 38 MIKC-type (32 MIKCc and six MIKC*) genes based on a phylogenetic analysis. Fifty-six of the 60 SsMADS genes were randomly distributed on 19 putative willow chromosomes. By combining gene structure analysis with evolutionary analysis, we found that the MIKC-type genes were more conserved and played a more important role in willow growth. Further study showed that the MIKC* type was a transition between the M-type and MIKC-type. Additionally, the number of MADS-box genes in gymnosperms was notably lower than that in angiosperms. Finally, the expression profiles of these willow MADS-box genes were analysed in five different tissues (root, stem, leave, bud and bark) and validated by RT-qPCR experiments. This study is the first genome-wide analysis of the willow MADS-box gene family, and the results establish a basis for further functional studies of willow MADS-box genes and serve as a reference for related studies of other woody plants." @default.
- W2942162801 created "2019-05-03" @default.
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- W2942162801 date "2019-11-07" @default.
- W2942162801 modified "2023-10-11" @default.
- W2942162801 title "Genome-wide identification and characterization of the MADS-box gene family in <i>Salix suchowensis</i>" @default.
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- W2942162801 doi "https://doi.org/10.7717/peerj.8019" @default.
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- W2942162801 hasPublicationYear "2019" @default.
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