FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2942400511> ?p ?o ?g. }

• W2942400511 abstract "Abstract Accurate and fast aligners are required to handle the steadily increasing volume of sequencing data. Here we present an approach allowing performant alignments of short reads (Illumina) as well as long reads (Pacific Bioscience, Ultralong Oxford Nanopore), while achieving high accuracy, based on a universal three-stage scheme. It is also suitable for the discovery of insertions and deletions that originate from structural variants. We comprehensively compare our approach to other state-of-the-art aligners in order to confirm its performance with respect to accuracy and runtime. As part of our algorithmic scheme, we introduce two line sweep-based techniques called “strip of consideration” and “seed harmonization”. These techniques represent a replacement for chaining and do not rely on any specially tailored data structures. Additionally, we propose a refined form of seeding on the foundation of the FMD-index." @default.
• W2942400511 created "2019-05-03" @default.
• W2942400511 creator A5013557795 @default.
• W2942400511 creator A5022498039 @default.
• W2942400511 creator A5035406736 @default.
• W2942400511 date "2019-04-26" @default.
• W2942400511 modified "2023-10-18" @default.
• W2942400511 title "Accurate high throughput alignment via line sweep-based seed processing" @default.
• W2942400511 cites W1520134085 @default.
• W2942400511 cites W1630717967 @default.
• W2942400511 cites W1989680950 @default.
• W2942400511 cites W1991330646 @default.
• W2942400511 cites W2017265532 @default.
• W2942400511 cites W2025648894 @default.
• W2942400511 cites W2037953066 @default.
• W2942400511 cites W2068448872 @default.
• W2942400511 cites W2074231493 @default.
• W2942400511 cites W2079604018 @default.
• W2942400511 cites W2085261163 @default.
• W2942400511 cites W2087064593 @default.
• W2942400511 cites W2093931624 @default.
• W2942400511 cites W2095824228 @default.
• W2942400511 cites W2097341408 @default.
• W2942400511 cites W2097862362 @default.
• W2942400511 cites W2105708056 @default.
• W2942400511 cites W2107282968 @default.
• W2942400511 cites W2119279650 @default.
• W2942400511 cites W2134283755 @default.
• W2942400511 cites W2136145671 @default.
• W2942400511 cites W2137015675 @default.
• W2942400511 cites W2137759177 @default.
• W2942400511 cites W2144560237 @default.
• W2942400511 cites W2161048357 @default.
• W2942400511 cites W2166637863 @default.
• W2942400511 cites W2170551349 @default.
• W2942400511 cites W2266239166 @default.
• W2942400511 cites W2289678372 @default.
• W2942400511 cites W2337261418 @default.
• W2942400511 cites W2414876472 @default.
• W2942400511 cites W2609131492 @default.
• W2942400511 cites W2892689606 @default.
• W2942400511 cites W2950121474 @default.
• W2942400511 cites W2952870794 @default.
• W2942400511 cites W4239035626 @default.
• W2942400511 cites W4253539230 @default.
• W2942400511 cites W53898165 @default.
• W2942400511 doi "https://doi.org/10.1038/s41467-019-09977-2" @default.
• W2942400511 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6486643" @default.
• W2942400511 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31028275" @default.
• W2942400511 hasPublicationYear "2019" @default.
• W2942400511 type Work @default.
• W2942400511 sameAs 2942400511 @default.
• W2942400511 citedByCount "11" @default.
• W2942400511 countsByYear W29424005112019 @default.
• W2942400511 countsByYear W29424005112020 @default.
• W2942400511 countsByYear W29424005112021 @default.
• W2942400511 countsByYear W29424005112022 @default.
• W2942400511 countsByYear W29424005112023 @default.
• W2942400511 crossrefType "journal-article" @default.
• W2942400511 hasAuthorship W2942400511A5013557795 @default.
• W2942400511 hasAuthorship W2942400511A5022498039 @default.
• W2942400511 hasAuthorship W2942400511A5035406736 @default.
• W2942400511 hasBestOaLocation W29424005111 @default.
• W2942400511 hasConcept C11413529 @default.
• W2942400511 hasConcept C124101348 @default.
• W2942400511 hasConcept C15744967 @default.
• W2942400511 hasConcept C157764524 @default.
• W2942400511 hasConcept C198352243 @default.
• W2942400511 hasConcept C2524010 @default.
• W2942400511 hasConcept C33923547 @default.
• W2942400511 hasConcept C41008148 @default.
• W2942400511 hasConcept C49020025 @default.
• W2942400511 hasConcept C542102704 @default.
• W2942400511 hasConcept C555944384 @default.
• W2942400511 hasConcept C76155785 @default.
• W2942400511 hasConceptScore W2942400511C11413529 @default.
• W2942400511 hasConceptScore W2942400511C124101348 @default.
• W2942400511 hasConceptScore W2942400511C15744967 @default.
• W2942400511 hasConceptScore W2942400511C157764524 @default.
• W2942400511 hasConceptScore W2942400511C198352243 @default.
• W2942400511 hasConceptScore W2942400511C2524010 @default.
• W2942400511 hasConceptScore W2942400511C33923547 @default.
• W2942400511 hasConceptScore W2942400511C41008148 @default.
• W2942400511 hasConceptScore W2942400511C49020025 @default.
• W2942400511 hasConceptScore W2942400511C542102704 @default.
• W2942400511 hasConceptScore W2942400511C555944384 @default.
• W2942400511 hasConceptScore W2942400511C76155785 @default.
• W2942400511 hasFunder F4320322120 @default.
• W2942400511 hasIssue "1" @default.
• W2942400511 hasLocation W29424005111 @default.
• W2942400511 hasLocation W29424005112 @default.
• W2942400511 hasLocation W29424005113 @default.
• W2942400511 hasOpenAccess W2942400511 @default.
• W2942400511 hasPrimaryLocation W29424005111 @default.
• W2942400511 hasRelatedWork W1489745481 @default.
• W2942400511 hasRelatedWork W160116885 @default.
• W2942400511 hasRelatedWork W2059929079 @default.
• W2942400511 hasRelatedWork W2388420286 @default.
• W2942400511 hasRelatedWork W2536200976 @default.
• W2942400511 hasRelatedWork W2577894571 @default.

• next