FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2947850496> ?p ?o ?g. }

• W2947850496 abstract "Aquaporins (AQPs) are a class of integral membrane proteins that facilitate the passive transport of water and other small solutes across biological membranes. Despite their importance, little information is available in cassava (Manihot esculenta), a perennial shrub of the Euphorbiaceae family that serves the sixth major staple crop in the world. This study presents a genome-wide analysis of the AQP gene family in cassava. The family of 42 members in this species could be divided into five subfamilies based on phylogenetic analysis, i.e., 14 plasma membrane intrinsic proteins (PIPs), 13 tonoplast intrinsic proteins (TIPs), nine NOD26-like intrinsic proteins (NIPs), four X intrinsic proteins (XIPs), and two small basic intrinsic proteins (SIPs). Best-reciprocal-hit-based sequence comparison and synteny analysis revealed 34 orthologous groups (OGs) present in the Euphorbiaceae ancestor, and nearly one-to-one or two-to-one orthologous relationships were observed between cassava with rubber/physic nut, reflecting the occurrence of one so-called ρ recent whole-genome duplication (WGD) in the last common ancestor of cassava and rubber. In contrast to a predominant role of the ρ WGD on family expansion in rubber, cassava AQP duplicates were derived from the WGD as well as local duplication. Species-specific gene loss was also observed in cassava, which includes the entire NIP4 group and/or six OGs. Comparison of conserved motifs and gene expression profiles revealed divergence of paralogs in cassava as observed in rubber. Our findings will not only improve our knowledge on family evolution in Euphorbiaceae, but also provide valuable information for further functional analysis of AQP genes in cassava and rubber." @default.
• W2947850496 created "2019-06-07" @default.
• W2947850496 creator A5027392535 @default.
• W2947850496 creator A5051773224 @default.
• W2947850496 date "2019-05-15" @default.
• W2947850496 modified "2023-10-14" @default.
• W2947850496 title "Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication" @default.
• W2947850496 cites W1485795926 @default.
• W2947850496 cites W1945895342 @default.
• W2947850496 cites W1962561849 @default.
• W2947850496 cites W1965927041 @default.
• W2947850496 cites W1971533507 @default.
• W2947850496 cites W1976445111 @default.
• W2947850496 cites W1976594815 @default.
• W2947850496 cites W1981634750 @default.
• W2947850496 cites W1984711473 @default.
• W2947850496 cites W2008856488 @default.
• W2947850496 cites W2016103052 @default.
• W2947850496 cites W2020134788 @default.
• W2947850496 cites W2025118554 @default.
• W2947850496 cites W2032067567 @default.
• W2947850496 cites W2063733074 @default.
• W2947850496 cites W2067568717 @default.
• W2947850496 cites W2074213315 @default.
• W2947850496 cites W2075436975 @default.
• W2947850496 cites W2084301655 @default.
• W2947850496 cites W2084304818 @default.
• W2947850496 cites W2088677010 @default.
• W2947850496 cites W2088850629 @default.
• W2947850496 cites W2091802319 @default.
• W2947850496 cites W2092398899 @default.
• W2947850496 cites W2092882875 @default.
• W2947850496 cites W2097971260 @default.
• W2947850496 cites W2099829545 @default.
• W2947850496 cites W2103405127 @default.
• W2947850496 cites W2110335151 @default.
• W2947850496 cites W2111181409 @default.
• W2947850496 cites W2113074959 @default.
• W2947850496 cites W2117781901 @default.
• W2947850496 cites W2119624475 @default.
• W2947850496 cites W2120381562 @default.
• W2947850496 cites W2125346198 @default.
• W2947850496 cites W2131510173 @default.
• W2947850496 cites W2132926880 @default.
• W2947850496 cites W2133749710 @default.
• W2947850496 cites W2135719986 @default.
• W2947850496 cites W2138471074 @default.
• W2947850496 cites W2141458291 @default.
• W2947850496 cites W2145100181 @default.
• W2947850496 cites W2148018829 @default.
• W2947850496 cites W2149085519 @default.
• W2947850496 cites W2150845008 @default.
• W2947850496 cites W2152207030 @default.
• W2947850496 cites W2155651473 @default.
• W2947850496 cites W2157009395 @default.
• W2947850496 cites W2158714788 @default.
• W2947850496 cites W2167724534 @default.
• W2947850496 cites W2168489961 @default.
• W2947850496 cites W2170551349 @default.
• W2947850496 cites W2176492308 @default.
• W2947850496 cites W2285972467 @default.
• W2947850496 cites W2320601283 @default.
• W2947850496 cites W2330645394 @default.
• W2947850496 cites W2340858006 @default.
• W2947850496 cites W2396830442 @default.
• W2947850496 cites W2426565016 @default.
• W2947850496 cites W2470558202 @default.
• W2947850496 cites W2487757870 @default.
• W2947850496 cites W2535951796 @default.
• W2947850496 cites W2573261213 @default.
• W2947850496 cites W2581859137 @default.
• W2947850496 cites W2587016553 @default.
• W2947850496 cites W2618979205 @default.
• W2947850496 cites W2740529270 @default.
• W2947850496 cites W2769006220 @default.
• W2947850496 cites W2781565092 @default.
• W2947850496 cites W2781873368 @default.
• W2947850496 cites W2886224966 @default.
• W2947850496 cites W2901071065 @default.
• W2947850496 cites W2901865671 @default.
• W2947850496 cites W2914017984 @default.
• W2947850496 cites W2916595848 @default.
• W2947850496 cites W2929661619 @default.
• W2947850496 cites W2939495069 @default.
• W2947850496 cites W4250423241 @default.
• W2947850496 cites W648473017 @default.
• W2947850496 doi "https://doi.org/10.1186/s12864-019-5780-4" @default.
• W2947850496 hasPubMedCentralId "https://www.ncbi.nlm.nih.gov/pmc/articles/6521647" @default.
• W2947850496 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31092186" @default.
• W2947850496 hasPublicationYear "2019" @default.
• W2947850496 type Work @default.
• W2947850496 sameAs 2947850496 @default.
• W2947850496 citedByCount "15" @default.
• W2947850496 countsByYear W29478504962019 @default.
• W2947850496 countsByYear W29478504962020 @default.
• W2947850496 countsByYear W29478504962021 @default.
• W2947850496 countsByYear W29478504962022 @default.
• W2947850496 countsByYear W29478504962023 @default.
• W2947850496 crossrefType "journal-article" @default.
• W2947850496 hasAuthorship W2947850496A5027392535 @default.

• next