FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W2948579684> ?p ?o ?g. }

• W2948579684 endingPage "341" @default.
• W2948579684 startingPage "337" @default.
• W2948579684 abstract "Lineage 1 (L1) is one of seven Mycobacterium tuberculosis complex (MTBC) lineages. The objective of this study was to improve the complex taxonomy of L1 using phylogenetic SNPs, and to look for the origin of the main L1 sublineage prevalent in Para, Brazil. We developed a high-throughput SNPs-typing assay based on 12-L1-specific SNPs. This assay allowed us to experimentally retrieve SNP patterns on nine of these twelve SNPs in 277 isolates previously tentatively assigned to L1 spoligotyping-based sublineages. Three collections were used: Pará-Brazil (71); RIVM, the Netherlands (102), Madagascar (104). One-hundred more results were generated in Silico using the PolyTB database. Based on the final SNPs combination, the samples were classified into 11 clusters (C1-C11). Most isolates within a SNP-based cluster shared a mutual spoligotyping-defined lineage. However, L1/EAI1-SOM (SIT48) and L1/EAI6-BGD1 (SIT591) showed a poor correlation with SNP data and are not monophyletic. L1/EAI8-MDG and L1/EAI3-IND belonged to C5; this result suggests that they share a common ancestor. L1.1.3/SIT129, a spoligotype pattern found in SNPs-cluster C6, was found to be shared between Pará/Brazil and Malawi. SIT129 was independently found to be highly prevalent in Mozambique, which suggests a migration history from East-Africa to Brazil during the 16th–18th slave trade period to Northern Brazil." @default.
• W2948579684 created "2019-06-14" @default.
• W2948579684 creator A5002063674 @default.
• W2948579684 creator A5004579706 @default.
• W2948579684 creator A5010241008 @default.
• W2948579684 creator A5011266702 @default.
• W2948579684 creator A5020677345 @default.
• W2948579684 creator A5025754154 @default.
• W2948579684 creator A5030306485 @default.
• W2948579684 creator A5033614039 @default.
• W2948579684 creator A5040777035 @default.
• W2948579684 creator A5050909687 @default.
• W2948579684 creator A5052062950 @default.
• W2948579684 creator A5059036658 @default.
• W2948579684 creator A5079123140 @default.
• W2948579684 creator A5081756586 @default.
• W2948579684 creator A5088210125 @default.
• W2948579684 creator A5091115918 @default.
• W2948579684 date "2019-09-01" @default.
• W2948579684 modified "2023-10-12" @default.
• W2948579684 title "Mycobacterium tuberculosis lineage 1 genetic diversity in Pará, Brazil, suggests common ancestry with east-African isolates potentially linked to historical slave trade" @default.
• W2948579684 cites W1605534712 @default.
• W2948579684 cites W1981960379 @default.
• W2948579684 cites W1990995210 @default.
• W2948579684 cites W2003025878 @default.
• W2948579684 cites W2008184711 @default.
• W2948579684 cites W2039704756 @default.
• W2948579684 cites W2039754718 @default.
• W2948579684 cites W2058417246 @default.
• W2948579684 cites W2069290534 @default.
• W2948579684 cites W2069468367 @default.
• W2948579684 cites W2096162460 @default.
• W2948579684 cites W2132026894 @default.
• W2948579684 cites W2136177559 @default.
• W2948579684 cites W2139803213 @default.
• W2948579684 cites W2150184179 @default.
• W2948579684 cites W2159769705 @default.
• W2948579684 cites W2164045886 @default.
• W2948579684 cites W2179347035 @default.
• W2948579684 cites W2193412202 @default.
• W2948579684 cites W2590852250 @default.
• W2948579684 cites W2883933613 @default.
• W2948579684 doi "https://doi.org/10.1016/j.meegid.2019.06.001" @default.
• W2948579684 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/31170529" @default.
• W2948579684 hasPublicationYear "2019" @default.
• W2948579684 type Work @default.
• W2948579684 sameAs 2948579684 @default.
• W2948579684 citedByCount "9" @default.
• W2948579684 countsByYear W29485796842019 @default.
• W2948579684 countsByYear W29485796842020 @default.
• W2948579684 countsByYear W29485796842021 @default.
• W2948579684 countsByYear W29485796842022 @default.
• W2948579684 crossrefType "journal-article" @default.
• W2948579684 hasAuthorship W2948579684A5002063674 @default.
• W2948579684 hasAuthorship W2948579684A5004579706 @default.
• W2948579684 hasAuthorship W2948579684A5010241008 @default.
• W2948579684 hasAuthorship W2948579684A5011266702 @default.
• W2948579684 hasAuthorship W2948579684A5020677345 @default.
• W2948579684 hasAuthorship W2948579684A5025754154 @default.
• W2948579684 hasAuthorship W2948579684A5030306485 @default.
• W2948579684 hasAuthorship W2948579684A5033614039 @default.
• W2948579684 hasAuthorship W2948579684A5040777035 @default.
• W2948579684 hasAuthorship W2948579684A5050909687 @default.
• W2948579684 hasAuthorship W2948579684A5052062950 @default.
• W2948579684 hasAuthorship W2948579684A5059036658 @default.
• W2948579684 hasAuthorship W2948579684A5079123140 @default.
• W2948579684 hasAuthorship W2948579684A5081756586 @default.
• W2948579684 hasAuthorship W2948579684A5088210125 @default.
• W2948579684 hasAuthorship W2948579684A5091115918 @default.
• W2948579684 hasBestOaLocation W29485796841 @default.
• W2948579684 hasConcept C104317684 @default.
• W2948579684 hasConcept C12326286 @default.
• W2948579684 hasConcept C135763542 @default.
• W2948579684 hasConcept C139275648 @default.
• W2948579684 hasConcept C142724271 @default.
• W2948579684 hasConcept C144024400 @default.
• W2948579684 hasConcept C149923435 @default.
• W2948579684 hasConcept C153209595 @default.
• W2948579684 hasConcept C193252679 @default.
• W2948579684 hasConcept C2776817793 @default.
• W2948579684 hasConcept C2777975735 @default.
• W2948579684 hasConcept C2779790121 @default.
• W2948579684 hasConcept C2781069245 @default.
• W2948579684 hasConcept C2781209916 @default.
• W2948579684 hasConcept C2908647359 @default.
• W2948579684 hasConcept C44465124 @default.
• W2948579684 hasConcept C54355233 @default.
• W2948579684 hasConcept C71924100 @default.
• W2948579684 hasConcept C78458016 @default.
• W2948579684 hasConcept C81977670 @default.
• W2948579684 hasConcept C86803240 @default.
• W2948579684 hasConceptScore W2948579684C104317684 @default.
• W2948579684 hasConceptScore W2948579684C12326286 @default.
• W2948579684 hasConceptScore W2948579684C135763542 @default.
• W2948579684 hasConceptScore W2948579684C139275648 @default.
• W2948579684 hasConceptScore W2948579684C142724271 @default.
• W2948579684 hasConceptScore W2948579684C144024400 @default.
• W2948579684 hasConceptScore W2948579684C149923435 @default.

• next